Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 AP000997.3-201ENST00000623333 2250 ntBASIC14.59□□□□□ -0.07
HIST1H1AQ02539 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 TFP1-202ENST00000475455 1573 ntBASIC14.59□□□□□ -0.07
HIST1H1AQ02539 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.58□□□□□ -0.07
HIST1H1AQ02539 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.58□□□□□ -0.07
HIST1H1AQ02539 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HIST1H1AQ02539 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.58□□□□□ -0.07
HIST1H1AQ02539 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.07
HIST1H1AQ02539 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
HIST1H1AQ02539 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HIST1H1AQ02539 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 PCDHB18P-201ENST00000524813 2368 ntBASIC14.58□□□□□ -0.08
HIST1H1AQ02539 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 GUSBP6-202ENST00000438529 1198 ntBASIC14.58□□□□□ -0.08
HIST1H1AQ02539 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIST1H1AQ02539 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms