Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDH6P55285 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH6P55285 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH6P55285 TSPY23P-201ENST00000440136 739 ntBASIC19.84■□□□□ 0.77
CDH6P55285 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH6P55285 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH6P55285 Z85996.1-201ENST00000494644 937 ntBASIC19.84■□□□□ 0.77
CDH6P55285 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.84■□□□□ 0.77
CDH6P55285 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDH6P55285 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH6P55285 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH6P55285 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH6P55285 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH6P55285 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH6P55285 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH6P55285 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH6P55285 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CDH6P55285 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH6P55285 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH6P55285 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH6P55285 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CDH6P55285 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH6P55285 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDH6P55285 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.83■□□□□ 0.77
CDH6P55285 AC098590.1-201ENST00000468126 897 ntBASIC19.83■□□□□ 0.77
CDH6P55285 RPS2P4-201ENST00000476944 856 ntBASIC19.83■□□□□ 0.77
CDH6P55285 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.83■□□□□ 0.77
CDH6P55285 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH6P55285 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.83■□□□□ 0.77
CDH6P55285 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH6P55285 AL353708.3-201ENST00000610272 989 ntBASIC19.83■□□□□ 0.77
CDH6P55285 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.83■□□□□ 0.77
CDH6P55285 AC131212.4-201ENST00000623606 975 ntBASIC19.83■□□□□ 0.77
CDH6P55285 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH6P55285 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.83■□□□□ 0.76
CDH6P55285 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDH6P55285 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH6P55285 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH6P55285 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH6P55285 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.83■□□□□ 0.76
CDH6P55285 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH6P55285 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CDH6P55285 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDH6P55285 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.82■□□□□ 0.76
CDH6P55285 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.82■□□□□ 0.76
CDH6P55285 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH6P55285 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CDH6P55285 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH6P55285 AC142381.4-202ENST00000563973 229 ntBASIC19.82■□□□□ 0.76
CDH6P55285 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH6P55285 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH6P55285 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH6P55285 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 CROCCP3-202ENST00000420820 1947 ntBASIC19.81■□□□□ 0.76
CDH6P55285 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.81■□□□□ 0.76
CDH6P55285 AL353807.1-201ENST00000427475 662 ntBASIC19.81■□□□□ 0.76
CDH6P55285 AC004980.1-204ENST00000429707 299 ntBASIC19.81■□□□□ 0.76
CDH6P55285 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH6P55285 GCSHP5-201ENST00000443090 522 ntBASIC19.81■□□□□ 0.76
CDH6P55285 KSR1P1-201ENST00000446298 240 ntBASIC19.81■□□□□ 0.76
CDH6P55285 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.81■□□□□ 0.76
CDH6P55285 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.81■□□□□ 0.76
CDH6P55285 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.81■□□□□ 0.76
CDH6P55285 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH6P55285 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.81■□□□□ 0.76
CDH6P55285 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH6P55285 TMEM191A-211ENST00000637163 1067 ntBASIC19.81■□□□□ 0.76
CDH6P55285 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDH6P55285 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDH6P55285 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CDH6P55285 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms