Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS2P54278 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PMS2P54278 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.68■□□□□ 0.74
PMS2P54278 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PMS2P54278 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PMS2P54278 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PMS2P54278 KRT18P29-201ENST00000397031 1267 ntBASIC19.68■□□□□ 0.74
PMS2P54278 AL512625.2-201ENST00000417533 625 ntBASIC19.68■□□□□ 0.74
PMS2P54278 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.68■□□□□ 0.74
PMS2P54278 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.68■□□□□ 0.74
PMS2P54278 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PMS2P54278 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.68■□□□□ 0.74
PMS2P54278 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.68■□□□□ 0.74
PMS2P54278 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PMS2P54278 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PMS2P54278 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.68■□□□□ 0.74
PMS2P54278 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS2P54278 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 AC104417.2-201ENST00000562989 1793 ntBASIC19.67■□□□□ 0.74
PMS2P54278 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PMS2P54278 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.67■□□□□ 0.74
PMS2P54278 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
PMS2P54278 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PMS2P54278 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.67■□□□□ 0.74
PMS2P54278 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PMS2P54278 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PMS2P54278 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PMS2P54278 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PMS2P54278 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS2P54278 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.66■□□□□ 0.74
PMS2P54278 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 AC068880.1-201ENST00000507289 2297 ntBASIC19.66■□□□□ 0.74
PMS2P54278 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 AC093787.1-201ENST00000450396 207 ntBASIC19.66■□□□□ 0.74
PMS2P54278 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.66■□□□□ 0.74
PMS2P54278 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.66■□□□□ 0.74
PMS2P54278 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.66■□□□□ 0.74
PMS2P54278 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.66■□□□□ 0.74
PMS2P54278 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PMS2P54278 LTB4R2-202ENST00000528054 3092 ntBASIC19.66■□□□□ 0.74
PMS2P54278 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
PMS2P54278 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PMS2P54278 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS2P54278 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PMS2P54278 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.65■□□□□ 0.74
PMS2P54278 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.65■□□□□ 0.74
PMS2P54278 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms