Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RPL13AP40429 AC105265.2-201ENST00000467189 838 ntBASIC13.17□□□□□ -0.3
RPL13AP40429 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 AC126544.1-201ENST00000580842 1059 ntBASIC13.17□□□□□ -0.3
RPL13AP40429 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 AC141586.5-201ENST00000624546 2050 ntBASIC13.17□□□□□ -0.3
RPL13AP40429 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RPL13AP40429 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.17□□□□□ -0.3
RPL13AP40429 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.17□□□□□ -0.3
RPL13AP40429 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RPL13AP40429 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.16□□□□□ -0.3
RPL13AP40429 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RPL13AP40429 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.16□□□□□ -0.3
RPL13AP40429 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 AC139713.2-201ENST00000641328 2723 ntBASIC13.16□□□□□ -0.3
RPL13AP40429 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RPL13AP40429 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.16□□□□□ -0.3
RPL13AP40429 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.16□□□□□ -0.3
RPL13AP40429 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RPL13AP40429 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.16□□□□□ -0.3
RPL13AP40429 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.16□□□□□ -0.3
RPL13AP40429 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.16□□□□□ -0.3
RPL13AP40429 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
RPL13AP40429 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
RPL13AP40429 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RPL13AP40429 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.15□□□□□ -0.3
RPL13AP40429 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
RPL13AP40429 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RPL13AP40429 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 NORAD-201ENST00000565493 5339 ntBASIC13.15□□□□□ -0.3
RPL13AP40429 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RPL13AP40429 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 OR2I1P-207ENST00000453522 948 ntBASIC13.15□□□□□ -0.3
RPL13AP40429 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC13.15□□□□□ -0.3
RPL13AP40429 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RPL13AP40429 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RPL13AP40429 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 CROCCP3-202ENST00000420820 1947 ntBASIC13.15□□□□□ -0.3
RPL13AP40429 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
RPL13AP40429 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RPL13AP40429 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RPL13AP40429 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.15□□□□□ -0.3
RPL13AP40429 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RPL13AP40429 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
RPL13AP40429 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
RPL13AP40429 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms