Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
COL8A2P25067 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.11■□□□□ 0.17
COL8A2P25067 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COL8A2P25067 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.11■□□□□ 0.17
COL8A2P25067 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 AC010653.2-201ENST00000623505 997 ntBASIC16.11■□□□□ 0.17
COL8A2P25067 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.11■□□□□ 0.17
COL8A2P25067 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.11■□□□□ 0.17
COL8A2P25067 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.11■□□□□ 0.17
COL8A2P25067 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
COL8A2P25067 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.11■□□□□ 0.17
COL8A2P25067 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.1■□□□□ 0.17
COL8A2P25067 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.1■□□□□ 0.17
COL8A2P25067 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
COL8A2P25067 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.1■□□□□ 0.17
COL8A2P25067 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.1■□□□□ 0.17
COL8A2P25067 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.1■□□□□ 0.17
COL8A2P25067 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.1■□□□□ 0.17
COL8A2P25067 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
COL8A2P25067 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.1■□□□□ 0.17
COL8A2P25067 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COL8A2P25067 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.1■□□□□ 0.17
COL8A2P25067 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
COL8A2P25067 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.1■□□□□ 0.17
COL8A2P25067 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL8A2P25067 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COL8A2P25067 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.09■□□□□ 0.17
COL8A2P25067 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.09■□□□□ 0.17
COL8A2P25067 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COL8A2P25067 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 TREX1-205ENST00000625293 1783 ntBASIC16.09■□□□□ 0.17
COL8A2P25067 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.09■□□□□ 0.17
COL8A2P25067 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.09■□□□□ 0.17
COL8A2P25067 CA15P1-201ENST00000481698 905 ntBASIC16.09■□□□□ 0.17
COL8A2P25067 PRSS44-201ENST00000515154 1146 ntBASIC16.09■□□□□ 0.17
COL8A2P25067 AL445228.2-201ENST00000605589 952 ntBASIC16.09■□□□□ 0.17
COL8A2P25067 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
COL8A2P25067 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COL8A2P25067 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.09■□□□□ 0.17
COL8A2P25067 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.09■□□□□ 0.17
COL8A2P25067 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COL8A2P25067 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COL8A2P25067 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL8A2P25067 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.08■□□□□ 0.17
COL8A2P25067 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL8A2P25067 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL8A2P25067 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL8A2P25067 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.08■□□□□ 0.17
COL8A2P25067 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL8A2P25067 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.08■□□□□ 0.17
COL8A2P25067 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.08■□□□□ 0.17
COL8A2P25067 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL8A2P25067 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.08■□□□□ 0.16
COL8A2P25067 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
COL8A2P25067 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
COL8A2P25067 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.08■□□□□ 0.16
COL8A2P25067 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COL8A2P25067 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.08■□□□□ 0.16
COL8A2P25067 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 KRT18P35-201ENST00000510488 1269 ntBASIC16.08■□□□□ 0.16
COL8A2P25067 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
COL8A2P25067 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms