Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
ZNF253O75346 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF253O75346 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF253O75346 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.85□□□□□ -0.03
ZNF253O75346 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ZNF253O75346 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.85□□□□□ -0.03
ZNF253O75346 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF253O75346 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF253O75346 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
ZNF253O75346 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF253O75346 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF253O75346 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.84□□□□□ -0.03
ZNF253O75346 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.84□□□□□ -0.03
ZNF253O75346 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF253O75346 AC087623.3-201ENST00000607047 1098 ntBASIC14.84□□□□□ -0.03
ZNF253O75346 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF253O75346 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
ZNF253O75346 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF253O75346 AC009113.1-201ENST00000570267 2443 ntBASIC14.84□□□□□ -0.03
ZNF253O75346 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ZNF253O75346 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF253O75346 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF253O75346 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF253O75346 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF253O75346 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.83□□□□□ -0.03
ZNF253O75346 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.83□□□□□ -0.03
ZNF253O75346 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
ZNF253O75346 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF253O75346 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.83□□□□□ -0.03
ZNF253O75346 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF253O75346 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.83□□□□□ -0.03
ZNF253O75346 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF253O75346 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF253O75346 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF253O75346 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF253O75346 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
ZNF253O75346 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF253O75346 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF253O75346 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF253O75346 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF253O75346 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF253O75346 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.83□□□□□ -0.04
ZNF253O75346 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF253O75346 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF253O75346 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF253O75346 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF253O75346 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ZNF253O75346 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF253O75346 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ZNF253O75346 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF253O75346 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ZNF253O75346 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ZNF253O75346 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF253O75346 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
ZNF253O75346 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF253O75346 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ZNF253O75346 AC073210.2-201ENST00000430369 194 ntBASIC14.82□□□□□ -0.04
ZNF253O75346 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF253O75346 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ZNF253O75346 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.82□□□□□ -0.04
ZNF253O75346 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.82□□□□□ -0.04
ZNF253O75346 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF253O75346 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF253O75346 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms