Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH17O14917 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDH17O14917 AC004980.1-204ENST00000429707 299 ntBASIC18.21■□□□□ 0.51
PCDH17O14917 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH17O14917 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH17O14917 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH17O14917 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH17O14917 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
PCDH17O14917 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH17O14917 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDH17O14917 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH17O14917 AC097493.4-201ENST00000641197 219 ntBASIC18.21■□□□□ 0.51
PCDH17O14917 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDH17O14917 AC093503.3-201ENST00000624917 2352 ntBASIC18.21■□□□□ 0.51
PCDH17O14917 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDH17O14917 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDH17O14917 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH17O14917 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDH17O14917 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH17O14917 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDH17O14917 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH17O14917 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH17O14917 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH17O14917 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 MIR6786-201ENST00000616843 113 ntBASIC18.2■□□□□ 0.5
PCDH17O14917 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH17O14917 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH17O14917 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDH17O14917 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PCDH17O14917 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDH17O14917 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH17O14917 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PCDH17O14917 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDH17O14917 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDH17O14917 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH17O14917 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PCDH17O14917 FITM1-202ENST00000559294 800 ntBASIC18.19■□□□□ 0.5
PCDH17O14917 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH17O14917 AP005242.2-201ENST00000580065 1175 ntBASIC18.19■□□□□ 0.5
PCDH17O14917 AC012306.2-201ENST00000609350 630 ntBASIC18.19■□□□□ 0.5
PCDH17O14917 HLA-A-209ENST00000638375 975 ntBASIC18.19■□□□□ 0.5
PCDH17O14917 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH17O14917 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH17O14917 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH17O14917 AC120498.9-201ENST00000339021 3867 ntBASIC18.19■□□□□ 0.5
PCDH17O14917 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH17O14917 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms