Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV2A0A0B4J234 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AP006294.2-201ENST00000641667 209 ntBASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV2A0A0B4J234 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 AC093484.2-201ENST00000580996 2166 ntBASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 AC004980.1-204ENST00000429707 299 ntBASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 AC233702.5-201ENST00000584107 538 ntBASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV2A0A0B4J234 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 PKD1P1-201ENST00000458669 6805 ntBASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 RPS2P55-201ENST00000397318 883 ntBASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 AC107956.1-201ENST00000494359 873 ntBASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms