Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 AL592293.1-201ENST00000502889 1188 ntBASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRAV7A0A075B6U4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAV7A0A075B6U4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 AL136379.1-201ENST00000623471 2642 ntBASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 REST-210ENST00000638187 1334 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAV7A0A075B6U4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAV7A0A075B6U4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms