Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4B1Q9Y6B7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 C2orf69P4-201ENST00000565394 541 ntBASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4B1Q9Y6B7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 AC083880.1-201ENST00000608266 535 ntBASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.31■□□□□ 0.52
AP4B1Q9Y6B7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 AL031598.1-201ENST00000561511 1773 ntBASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
AP4B1Q9Y6B7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms