Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 TSPY14P-201ENST00000303979 915 ntBASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 PHGDH-210ENST00000641115 1638 ntBASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGA6Q9Y5G7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PCDHGA6Q9Y5G7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGA6Q9Y5G7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDHGA6Q9Y5G7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHGA6Q9Y5G7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHGA6Q9Y5G7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PCDHGA6Q9Y5G7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 KRT18P57-201ENST00000443599 1254 ntBASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 AC011506.1-201ENST00000474329 610 ntBASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGA6Q9Y5G7 BX119927.1-201ENST00000636596 1552 ntBASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA6Q9Y5G7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA6Q9Y5G7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms