Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 YBX1P10-201ENST00000444752 975 ntBASIC20.58■□□□□ 0.89
USP15Q9Y4E8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 KRT18P16-201ENST00000510337 1294 ntBASIC20.58■□□□□ 0.89
USP15Q9Y4E8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.58■□□□□ 0.89
USP15Q9Y4E8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.58■□□□□ 0.88
USP15Q9Y4E8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 TUBB8P6-201ENST00000436895 1288 ntBASIC20.57■□□□□ 0.88
USP15Q9Y4E8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 AC008040.2-201ENST00000461049 708 ntBASIC20.57■□□□□ 0.88
USP15Q9Y4E8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 AC011558.1-201ENST00000623459 338 ntBASIC20.57■□□□□ 0.88
USP15Q9Y4E8 AC141257.4-201ENST00000634557 245 ntBASIC20.57■□□□□ 0.88
USP15Q9Y4E8 AC136944.6-201ENST00000634818 245 ntBASIC20.57■□□□□ 0.88
USP15Q9Y4E8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.57■□□□□ 0.88
USP15Q9Y4E8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 SLC25A1P2-201ENST00000430693 912 ntBASIC20.56■□□□□ 0.88
USP15Q9Y4E8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP15Q9Y4E8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP15Q9Y4E8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms