Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 AC120498.10-201ENST00000621827 505 ntBASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHTOPQ9Y3Y2 KRT16P2-201ENST00000414673 1423 ntBASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 Z98044.1-201ENST00000632503 1764 ntBASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CHTOPQ9Y3Y2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 KRT16P3-201ENST00000439127 1283 ntBASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 AL031598.1-201ENST00000561511 1773 ntBASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.7□□□□□ -0.22
CHTOPQ9Y3Y2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHTOPQ9Y3Y2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms