Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBQLN1Q9UMX0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBQLN1Q9UMX0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 AP003041.3-201ENST00000527151 707 ntBASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.51■□□□□ 0.87
UBQLN1Q9UMX0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UBQLN1Q9UMX0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN1Q9UMX0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 AL512604.3-201ENST00000569583 964 ntBASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
UBQLN1Q9UMX0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms