Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.111e-6■■■□□ 18.2
CSTF2TQ9H0L4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.55□□□□□ -0.081e-6■■■□□ 18.2
CSTF2TQ9H0L4 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.321e-6■■■□□ 18.2
CSTF2TQ9H0L4 MXD4-202ENST00000510822 561 ntTSL 315.75■□□□□ 0.117e-7■■■□□ 18.2
CSTF2TQ9H0L4 MXD4-205ENST00000515378 522 ntTSL 213.95□□□□□ -0.187e-7■■■□□ 18.2
CSTF2TQ9H0L4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.53e-12■■■□□ 18.2
CSTF2TQ9H0L4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.718e-7■■■□□ 18.2
CSTF2TQ9H0L4 CNOT6-206ENST00000510148 456 ntTSL 423.52■■□□□ 1.361e-6■■■□□ 18.2
CSTF2TQ9H0L4 CNOT6-205ENST00000507016 382 ntTSL 322.12■■□□□ 1.131e-6■■■□□ 18.2
CSTF2TQ9H0L4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.471e-6■■■□□ 18.2
CSTF2TQ9H0L4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.41e-6■■■□□ 18.2
CSTF2TQ9H0L4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.221e-6■■■□□ 18.2
CSTF2TQ9H0L4 TUBGCP6-208ENST00000498611 5274 ntTSL 1 (best)17■□□□□ 0.313e-6■■■□□ 18.2
CSTF2TQ9H0L4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.11■□□□□ 0.173e-6■■■□□ 18.2
CSTF2TQ9H0L4 TUBGCP6-203ENST00000434349 830 ntTSL 515.41■□□□□ 0.063e-6■■■□□ 18.2
CSTF2TQ9H0L4 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.263e-6■■■□□ 18.2
CSTF2TQ9H0L4 GRAMD4-207ENST00000490378 193 ntTSL 32.5□□□□□ -2.013e-6■■■□□ 18.2
CSTF2TQ9H0L4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.572e-8■■■□□ 18.2
CSTF2TQ9H0L4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.022e-8■■■□□ 18.2
CSTF2TQ9H0L4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.487e-10■■■□□ 18.2
CSTF2TQ9H0L4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.087e-10■■■□□ 18.2
CSTF2TQ9H0L4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.68■□□□□ 0.748e-9■■■□□ 18.2
CSTF2TQ9H0L4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.587e-10■■■□□ 18.2
CSTF2TQ9H0L4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.367e-10■■■□□ 18.2
CSTF2TQ9H0L4 AGAP1-206ENST00000418654 826 ntTSL 38.62□□□□□ -1.037e-10■■■□□ 18.2
CSTF2TQ9H0L4 AGAP1-208ENST00000448025 757 ntTSL 58.53□□□□□ -1.047e-10■■■□□ 18.2
CSTF2TQ9H0L4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.02■□□□□ 0.473e-7■■■□□ 18.2
CSTF2TQ9H0L4 MEF2D-205ENST00000475587 1627 ntTSL 517.36■□□□□ 0.373e-7■■■□□ 18.2
CSTF2TQ9H0L4 MEF2D-206ENST00000489057 593 ntTSL 517.01■□□□□ 0.313e-7■■■□□ 18.2
CSTF2TQ9H0L4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.123e-7■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-216ENST00000526710 996 ntTSL 219.28■□□□□ 0.682e-11■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-228ENST00000529832 600 ntTSL 417.56■□□□□ 0.42e-11■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-209ENST00000524900 343 ntTSL 516.47■□□□□ 0.232e-11■■■□□ 18.2
CSTF2TQ9H0L4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.75□□□□□ -0.052e-7■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-231ENST00000530306 583 ntTSL 214.67□□□□□ -0.062e-11■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-211ENST00000525261 559 ntTSL 214.01□□□□□ -0.172e-11■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-245ENST00000532596 761 ntTSL 414.01□□□□□ -0.172e-11■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-233ENST00000530545 616 ntTSL 412.84□□□□□ -0.352e-11■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-220ENST00000528303 558 ntTSL 412.27□□□□□ -0.452e-11■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-254ENST00000534475 538 ntTSL 411.77□□□□□ -0.532e-11■■■□□ 18.2
CSTF2TQ9H0L4 EEF1D-255ENST00000534804 555 ntTSL 47.93□□□□□ -1.142e-11■■■□□ 18.2
CSTF2TQ9H0L4 LRRC75A-AS1-224ENST00000581718 574 ntTSL 217.93■□□□□ 0.462e-6■■■□□ 18.1
CSTF2TQ9H0L4 LRRC75A-AS1-203ENST00000472367 794 ntTSL 316.83■□□□□ 0.282e-6■■■□□ 18.1
CSTF2TQ9H0L4 LRRC75A-AS1-212ENST00000483588 688 ntTSL 316.15■□□□□ 0.182e-6■■■□□ 18.1
CSTF2TQ9H0L4 LRRC75A-AS1-229ENST00000584177 574 ntTSL 415.73■□□□□ 0.112e-6■■■□□ 18.1
CSTF2TQ9H0L4 LRRC75A-AS1-207ENST00000478103 712 ntTSL 39.82□□□□□ -0.842e-6■■■□□ 18.1
CSTF2TQ9H0L4 LRRC75A-AS1-222ENST00000580770 572 ntTSL 49.4□□□□□ -0.92e-6■■■□□ 18.1
CSTF2TQ9H0L4 LRRC75A-AS1-227ENST00000583400 712 ntTSL 49.26□□□□□ -0.932e-6■■■□□ 18.1
CSTF2TQ9H0L4 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC9.23□□□□□ -0.932e-6■■■□□ 18.1
CSTF2TQ9H0L4 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.49□□□□□ -1.212e-6■■■□□ 18.1
CSTF2TQ9H0L4 ARHGEF1-217ENST00000598812 588 ntTSL 518.64■□□□□ 0.572e-6■■■□□ 18.1
CSTF2TQ9H0L4 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.447e-9■■■□□ 18.1
CSTF2TQ9H0L4 BNIP3L-203ENST00000520077 922 ntTSL 1 (best)10.72□□□□□ -0.697e-9■■■□□ 18.1
CSTF2TQ9H0L4 BNIP3L-207ENST00000523949 875 ntTSL 38.94□□□□□ -0.987e-9■■■□□ 18.1
CSTF2TQ9H0L4 HDAC5-205ENST00000587135 504 ntTSL 218.18■□□□□ 0.56e-7■■■□□ 18.1
CSTF2TQ9H0L4 HDAC5-209ENST00000588703 445 ntTSL 316.92■□□□□ 0.36e-7■■■□□ 18.1
CSTF2TQ9H0L4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.026e-7■■■□□ 18.1
CSTF2TQ9H0L4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.78□□□□□ -0.046e-7■■■□□ 18.1
CSTF2TQ9H0L4 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.656e-7■■■□□ 18.1
CSTF2TQ9H0L4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.54□□□□□ -0.243e-6■■■□□ 18.1
CSTF2TQ9H0L4 ANAPC2-203ENST00000483432 793 ntTSL 216.73■□□□□ 0.275e-8■■■□□ 18.1
CSTF2TQ9H0L4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.075e-8■■■□□ 18.1
CSTF2TQ9H0L4 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.721e-7■■■□□ 18.1
CSTF2TQ9H0L4 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.263e-12■■■□□ 18.1
CSTF2TQ9H0L4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.68■■□□□ 1.062e-6■■■□□ 18.1
CSTF2TQ9H0L4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.39■□□□□ 0.852e-6■■■□□ 18.1
CSTF2TQ9H0L4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.68■□□□□ 0.742e-6■■■□□ 18.1
CSTF2TQ9H0L4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.552e-6■■■□□ 18.1
CSTF2TQ9H0L4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.512e-6■■■□□ 18.1
CSTF2TQ9H0L4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.73■□□□□ 0.432e-6■■■□□ 18.1
CSTF2TQ9H0L4 KIAA0930-205ENST00000417906 516 ntTSL 515.79■□□□□ 0.121e-6■■■□□ 18.1
CSTF2TQ9H0L4 KIAA0930-211ENST00000486640 574 ntTSL 412.84□□□□□ -0.351e-6■■■□□ 18.1
CSTF2TQ9H0L4 KIAA0930-204ENST00000414854 556 ntTSL 412.69□□□□□ -0.381e-6■■■□□ 18.1
CSTF2TQ9H0L4 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.941e-6■■■□□ 18.1
CSTF2TQ9H0L4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.061e-7■■■□□ 18.1
CSTF2TQ9H0L4 ZBTB7B-206ENST00000487542 873 ntTSL 221.08■□□□□ 0.974e-7■■■□□ 18.1
CSTF2TQ9H0L4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.244e-7■■■□□ 18.1
CSTF2TQ9H0L4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.324e-7■■■□□ 18.1
CSTF2TQ9H0L4 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.454e-7■■■□□ 18.1
CSTF2TQ9H0L4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.415e-7■■■□□ 18.1
CSTF2TQ9H0L4 RHOF-207ENST00000546227 1219 ntTSL 520.5■□□□□ 0.871e-6■■■□□ 18.1
CSTF2TQ9H0L4 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.493e-7■■■□□ 18.1
CSTF2TQ9H0L4 NPR2-205ENST00000464810 3502 ntTSL 211.52□□□□□ -0.573e-7■■■□□ 18.1
CSTF2TQ9H0L4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.131e-6■■■□□ 18.1
CSTF2TQ9H0L4 KIFC3-235ENST00000623271 2393 nt12.21□□□□□ -0.468e-10■■■□□ 18.1
CSTF2TQ9H0L4 AP2A2-212ENST00000528195 562 ntTSL 317.1■□□□□ 0.333e-7■■■□□ 18.1
CSTF2TQ9H0L4 TAL1-204ENST00000464796 237 ntTSL 1 (best)8.29□□□□□ -1.085e-7■■■□□ 18.1
CSTF2TQ9H0L4 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC11.83□□□□□ -0.524e-7■■■□□ 18.1
CSTF2TQ9H0L4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.371e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-205ENST00000586817 2441 ntTSL 220.86■□□□□ 0.933e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.23■□□□□ 0.833e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-209ENST00000591767 1214 ntTSL 216.16■□□□□ 0.183e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-208ENST00000591709 685 ntTSL 216.16■□□□□ 0.183e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-201ENST00000215587 1286 ntTSL 315.1■□□□□ 0.013e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-212ENST00000614705 589 ntTSL 414.95□□□□□ -0.023e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-210ENST00000592597 440 ntTSL 214.63□□□□□ -0.073e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-206ENST00000589737 1105 ntTSL 214.32□□□□□ -0.123e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.23e-6■■■□□ 18.1
CSTF2TQ9H0L4 POLR2E-202ENST00000585838 487 ntTSL 59.73□□□□□ -0.853e-6■■■□□ 18.1
CSTF2TQ9H0L4 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.355e-17■■■□□ 18.1
Retrieved 100 of 19,151 protein–RNA pairs in 145.6 ms