Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 RARRES2P10-201ENST00000564312 460 ntBASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 AC120498.9-201ENST00000339021 3867 ntBASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
NUDCD1Q96RS6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 HTR7P1-201ENST00000538670 1336 ntBASIC19.74■□□□□ 0.75
NUDCD1Q96RS6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUDCD1Q96RS6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUDCD1Q96RS6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms