Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
ZNF439Q8NDP4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.83■□□□□ 0.13
ZNF439Q8NDP4 TEX21P-204ENST00000641479 1693 ntBASIC15.83■□□□□ 0.13
ZNF439Q8NDP4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF439Q8NDP4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF439Q8NDP4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
ZNF439Q8NDP4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 AC141586.3-201ENST00000562166 1838 ntBASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF439Q8NDP4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 C1QL1P1-201ENST00000568105 661 ntBASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF439Q8NDP4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 AC098818.2-201ENST00000564925 2320 ntBASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 AP000974.1-201ENST00000623909 2387 ntBASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF439Q8NDP4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF439Q8NDP4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF439Q8NDP4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF439Q8NDP4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
ZNF439Q8NDP4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF439Q8NDP4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms