Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCUBE3Q8IX30 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 RBM17P1-201ENST00000453646 1190 ntBASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCUBE3Q8IX30 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 IRX1P1-201ENST00000438849 1838 ntBASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 AL049812.1-201ENST00000432563 2267 ntBASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.09■□□□□ 0.81
SCUBE3Q8IX30 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 AC079598.2-202ENST00000546624 1451 ntBASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 UNC93B2-201ENST00000285383 730 ntBASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 AC097488.1-201ENST00000507834 756 ntBASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 SLC25A1P4-201ENST00000567977 778 ntBASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.08■□□□□ 0.81
SCUBE3Q8IX30 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCUBE3Q8IX30 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCUBE3Q8IX30 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SCUBE3Q8IX30 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.08■□□□□ 0.8
SCUBE3Q8IX30 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.08■□□□□ 0.8
SCUBE3Q8IX30 AL161938.1-201ENST00000569833 2180 ntBASIC20.08■□□□□ 0.8
SCUBE3Q8IX30 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCUBE3Q8IX30 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 AIRN-201ENST00000601203 4374 ntBASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.07■□□□□ 0.8
SCUBE3Q8IX30 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms