Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 FP475955.4-201ENST00000623131 1990 ntBASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 Z99916.2-201ENST00000604037 246 ntBASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNI2Q6ZMN8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 LSM12P1-201ENST00000411836 588 ntBASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 KRT8P20-201ENST00000423953 1409 ntBASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCNI2Q6ZMN8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 SNORA78-201ENST00000459373 127 ntBASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.22■□□□□ 0.83
CCNI2Q6ZMN8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNI2Q6ZMN8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNI2Q6ZMN8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNI2Q6ZMN8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNI2Q6ZMN8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCNI2Q6ZMN8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNI2Q6ZMN8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms