Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.22■□□□□ 0.35
RNFT1Q5M7Z0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.22■□□□□ 0.35
RNFT1Q5M7Z0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.22■□□□□ 0.35
RNFT1Q5M7Z0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.22■□□□□ 0.35
RNFT1Q5M7Z0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNFT1Q5M7Z0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNFT1Q5M7Z0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNFT1Q5M7Z0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 AC125437.2-201ENST00000625180 2167 ntBASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 UPK3BP1-201ENST00000428678 509 ntBASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 TSPY21P-201ENST00000433481 731 ntBASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 AC091076.1-201ENST00000610741 619 ntBASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNFT1Q5M7Z0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNFT1Q5M7Z0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNFT1Q5M7Z0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNFT1Q5M7Z0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.34
RNFT1Q5M7Z0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RNFT1Q5M7Z0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 FAM86EP-206ENST00000510506 987 ntBASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.2■□□□□ 0.34
RNFT1Q5M7Z0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 AL671277.2-201ENST00000458060 996 ntBASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 GCSHP2-201ENST00000560971 527 ntBASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 CR769767.2-201ENST00000622735 460 ntBASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 TREX1-205ENST00000625293 1783 ntBASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms