Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CFAP221Q4G0U5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.81■□□□□ 0.92
CFAP221Q4G0U5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CFAP221Q4G0U5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP221Q4G0U5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP221Q4G0U5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CFAP221Q4G0U5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 AP002982.1-201ENST00000492365 877 ntBASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 C1QL1P1-201ENST00000568105 661 ntBASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 CD177P1-201ENST00000606252 935 ntBASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 AP001271.2-201ENST00000624018 1556 ntBASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CFAP221Q4G0U5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 NIFKP9-201ENST00000419265 221 ntBASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CFAP221Q4G0U5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 NEFHP1-201ENST00000412845 2629 ntBASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CFAP221Q4G0U5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
CFAP221Q4G0U5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP221Q4G0U5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms