Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 SPDYE13P-201ENST00000445314 798 ntBASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHROOM1Q2M3G4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 AC112907.2-201ENST00000448639 330 ntBASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 AL512604.3-201ENST00000569583 964 ntBASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 AL031432.5-201ENST00000641059 760 ntBASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SHROOM1Q2M3G4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SHROOM1Q2M3G4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 IER3-202ENST00000376377 1350 ntBASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHROOM1Q2M3G4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 AC093458.2-201ENST00000623150 629 ntBASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SHROOM1Q2M3G4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 Z82202.1-201ENST00000623446 1880 ntBASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SHROOM1Q2M3G4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms