Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNB3Q15768 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNB3Q15768 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB3Q15768 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.29■□□□□ 0.2
EFNB3Q15768 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB3Q15768 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EFNB3Q15768 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB3Q15768 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EFNB3Q15768 TSPY23P-201ENST00000440136 739 ntBASIC16.29■□□□□ 0.2
EFNB3Q15768 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNB3Q15768 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNB3Q15768 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB3Q15768 AL138966.2-201ENST00000621997 464 ntBASIC16.29■□□□□ 0.2
EFNB3Q15768 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.29■□□□□ 0.2
EFNB3Q15768 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB3Q15768 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB3Q15768 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNB3Q15768 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EFNB3Q15768 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNB3Q15768 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EFNB3Q15768 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.28■□□□□ 0.2
EFNB3Q15768 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
EFNB3Q15768 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 SDHAP1-207ENST00000440850 2000 ntBASIC16.28■□□□□ 0.2
EFNB3Q15768 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.28■□□□□ 0.2
EFNB3Q15768 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
EFNB3Q15768 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
EFNB3Q15768 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
EFNB3Q15768 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.28■□□□□ 0.2
EFNB3Q15768 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.28■□□□□ 0.2
EFNB3Q15768 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
EFNB3Q15768 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.28■□□□□ 0.2
EFNB3Q15768 TREX1-205ENST00000625293 1783 ntBASIC16.28■□□□□ 0.2
EFNB3Q15768 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
EFNB3Q15768 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNB3Q15768 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
EFNB3Q15768 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
EFNB3Q15768 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.27■□□□□ 0.2
EFNB3Q15768 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
EFNB3Q15768 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.27■□□□□ 0.2
EFNB3Q15768 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.27■□□□□ 0.2
EFNB3Q15768 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.27■□□□□ 0.2
EFNB3Q15768 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
EFNB3Q15768 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.27■□□□□ 0.2
EFNB3Q15768 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.27■□□□□ 0.2
EFNB3Q15768 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
EFNB3Q15768 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.27■□□□□ 0.2
EFNB3Q15768 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFNB3Q15768 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFNB3Q15768 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.27■□□□□ 0.19
EFNB3Q15768 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EFNB3Q15768 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms