Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.48■■□□□ 1.51
EIF4A1P60842 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
EIF4A1P60842 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
EIF4A1P60842 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.47■■□□□ 1.51
EIF4A1P60842 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.47■■□□□ 1.51
EIF4A1P60842 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
EIF4A1P60842 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.47■■□□□ 1.51
EIF4A1P60842 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
EIF4A1P60842 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
EIF4A1P60842 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
EIF4A1P60842 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.46■■□□□ 1.51
EIF4A1P60842 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
EIF4A1P60842 AFG3L1P-217ENST00000557444 2447 ntBASIC24.46■■□□□ 1.51
EIF4A1P60842 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
EIF4A1P60842 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
EIF4A1P60842 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC24.46■■□□□ 1.51
EIF4A1P60842 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
EIF4A1P60842 LINC01238-205ENST00000567549 1107 ntBASIC24.46■■□□□ 1.51
EIF4A1P60842 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.46■■□□□ 1.51
EIF4A1P60842 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.46■■□□□ 1.51
EIF4A1P60842 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
EIF4A1P60842 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.46■■□□□ 1.51
EIF4A1P60842 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.46■■□□□ 1.51
EIF4A1P60842 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.46■■□□□ 1.51
EIF4A1P60842 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
EIF4A1P60842 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.46■■□□□ 1.51
EIF4A1P60842 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.46■■□□□ 1.51
EIF4A1P60842 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
EIF4A1P60842 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
EIF4A1P60842 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.45■■□□□ 1.51
EIF4A1P60842 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.51
EIF4A1P60842 KRT8P3-201ENST00000519669 1449 ntBASIC24.45■■□□□ 1.51
EIF4A1P60842 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
EIF4A1P60842 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
EIF4A1P60842 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 AL023284.2-201ENST00000405850 579 ntBASIC24.45■■□□□ 1.5
EIF4A1P60842 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.45■■□□□ 1.5
EIF4A1P60842 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 KRT18P38-201ENST00000449496 1282 ntBASIC24.45■■□□□ 1.5
EIF4A1P60842 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.45■■□□□ 1.5
EIF4A1P60842 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.45■■□□□ 1.5
EIF4A1P60842 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 NEK4P2-201ENST00000580004 1012 ntBASIC24.45■■□□□ 1.5
EIF4A1P60842 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
EIF4A1P60842 AC140113.3-201ENST00000605663 199 ntBASIC24.45■■□□□ 1.5
EIF4A1P60842 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.45■■□□□ 1.5
EIF4A1P60842 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
EIF4A1P60842 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.45■■□□□ 1.5
EIF4A1P60842 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.44■■□□□ 1.5
EIF4A1P60842 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
EIF4A1P60842 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
EIF4A1P60842 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
EIF4A1P60842 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.44■■□□□ 1.5
EIF4A1P60842 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
EIF4A1P60842 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EIF4A1P60842 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
EIF4A1P60842 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EIF4A1P60842 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EIF4A1P60842 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.44■■□□□ 1.5
EIF4A1P60842 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.44■■□□□ 1.5
EIF4A1P60842 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
EIF4A1P60842 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.44■■□□□ 1.5
EIF4A1P60842 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
EIF4A1P60842 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.44■■□□□ 1.5
EIF4A1P60842 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
EIF4A1P60842 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.43■■□□□ 1.5
EIF4A1P60842 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.43■■□□□ 1.5
EIF4A1P60842 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
EIF4A1P60842 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.43■■□□□ 1.5
EIF4A1P60842 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.43■■□□□ 1.5
EIF4A1P60842 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.43■■□□□ 1.5
EIF4A1P60842 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.43■■□□□ 1.5
EIF4A1P60842 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
EIF4A1P60842 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
EIF4A1P60842 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.43■■□□□ 1.5
EIF4A1P60842 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
EIF4A1P60842 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
EIF4A1P60842 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
EIF4A1P60842 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.43■■□□□ 1.5
EIF4A1P60842 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
EIF4A1P60842 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.43■■□□□ 1.5
EIF4A1P60842 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.43■■□□□ 1.5
EIF4A1P60842 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
EIF4A1P60842 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 280.4 ms