Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SLC25A3P1-201ENST00000443844 931 ntBASIC19.7■□□□□ 0.74
COPAP53621 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.7■□□□□ 0.74
COPAP53621 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.7■□□□□ 0.74
COPAP53621 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COPAP53621 AL445228.2-201ENST00000605589 952 ntBASIC19.7■□□□□ 0.74
COPAP53621 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COPAP53621 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.7■□□□□ 0.74
COPAP53621 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPAP53621 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.69■□□□□ 0.74
COPAP53621 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
COPAP53621 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COPAP53621 KRT18P57-201ENST00000443599 1254 ntBASIC19.69■□□□□ 0.74
COPAP53621 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.69■□□□□ 0.74
COPAP53621 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.69■□□□□ 0.74
COPAP53621 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.69■□□□□ 0.74
COPAP53621 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.69■□□□□ 0.74
COPAP53621 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COPAP53621 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPAP53621 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.68■□□□□ 0.74
COPAP53621 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
COPAP53621 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.68■□□□□ 0.74
COPAP53621 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
COPAP53621 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.68■□□□□ 0.74
COPAP53621 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.68■□□□□ 0.74
COPAP53621 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COPAP53621 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
COPAP53621 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.68■□□□□ 0.74
COPAP53621 AC097488.1-201ENST00000507834 756 ntBASIC19.68■□□□□ 0.74
COPAP53621 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COPAP53621 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.68■□□□□ 0.74
COPAP53621 AC130371.2-201ENST00000619443 611 ntBASIC19.68■□□□□ 0.74
COPAP53621 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.68■□□□□ 0.74
COPAP53621 RCC2P6-201ENST00000526625 1557 ntBASIC19.68■□□□□ 0.74
COPAP53621 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.68■□□□□ 0.74
COPAP53621 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
COPAP53621 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.68■□□□□ 0.74
COPAP53621 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPAP53621 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.67■□□□□ 0.74
COPAP53621 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPAP53621 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPAP53621 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COPAP53621 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPAP53621 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPAP53621 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPAP53621 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPAP53621 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPAP53621 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPAP53621 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COPAP53621 AL137013.1-201ENST00000432946 1228 ntBASIC19.67■□□□□ 0.74
COPAP53621 AC008040.2-201ENST00000461049 708 ntBASIC19.67■□□□□ 0.74
COPAP53621 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.67■□□□□ 0.74
COPAP53621 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.67■□□□□ 0.74
COPAP53621 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms