Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHC1P29353 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHC1P29353 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHC1P29353 LINC01465-201ENST00000408887 1940 ntBASIC17.52■□□□□ 0.4
SHC1P29353 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SHC1P29353 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHC1P29353 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
SHC1P29353 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC1P29353 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
SHC1P29353 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC1P29353 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC1P29353 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC1P29353 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHC1P29353 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC1P29353 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SHC1P29353 AF186192.3-201ENST00000583427 947 ntBASIC17.51■□□□□ 0.39
SHC1P29353 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC1P29353 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 HLA-A-209ENST00000638375 975 ntBASIC17.51■□□□□ 0.39
SHC1P29353 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SHC1P29353 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC1P29353 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHC1P29353 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SHC1P29353 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC1P29353 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC1P29353 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC1P29353 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SHC1P29353 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SHC1P29353 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC1P29353 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SHC1P29353 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SHC1P29353 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 RPS2P55-201ENST00000397318 883 ntBASIC17.5■□□□□ 0.39
SHC1P29353 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC1P29353 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC1P29353 RPS2P4-201ENST00000476944 856 ntBASIC17.5■□□□□ 0.39
SHC1P29353 AC107956.1-201ENST00000494359 873 ntBASIC17.5■□□□□ 0.39
SHC1P29353 AC093827.2-201ENST00000512654 315 ntBASIC17.5■□□□□ 0.39
SHC1P29353 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.5■□□□□ 0.39
SHC1P29353 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.5■□□□□ 0.39
SHC1P29353 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC1P29353 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SHC1P29353 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC1P29353 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC1P29353 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC1P29353 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHC1P29353 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC1P29353 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.49■□□□□ 0.39
SHC1P29353 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC1P29353 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SHC1P29353 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.49■□□□□ 0.39
SHC1P29353 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC1P29353 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.49■□□□□ 0.39
SHC1P29353 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.49■□□□□ 0.39
SHC1P29353 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SHC1P29353 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SHC1P29353 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC1P29353 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHC1P29353 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHC1P29353 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.49■□□□□ 0.39
SHC1P29353 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.48■□□□□ 0.39
SHC1P29353 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 AC026471.1-201ENST00000564629 3026 ntBASIC17.48■□□□□ 0.39
SHC1P29353 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.48■□□□□ 0.39
SHC1P29353 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHC1P29353 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms