Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.3■□□□□ 0.68
XPAP23025 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.3■□□□□ 0.68
XPAP23025 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.3■□□□□ 0.68
XPAP23025 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
XPAP23025 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.3■□□□□ 0.68
XPAP23025 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.3■□□□□ 0.68
XPAP23025 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.3■□□□□ 0.68
XPAP23025 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.3■□□□□ 0.68
XPAP23025 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XPAP23025 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
XPAP23025 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
XPAP23025 KRT8P9-201ENST00000558927 1449 ntBASIC19.29■□□□□ 0.68
XPAP23025 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
XPAP23025 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.29■□□□□ 0.68
XPAP23025 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.29■□□□□ 0.68
XPAP23025 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.29■□□□□ 0.68
XPAP23025 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.29■□□□□ 0.68
XPAP23025 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.29■□□□□ 0.68
XPAP23025 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
XPAP23025 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
XPAP23025 SLC25A24-204ENST00000569674 2357 ntBASIC19.29■□□□□ 0.68
XPAP23025 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 KRT8P41-201ENST00000533985 1514 ntBASIC19.29■□□□□ 0.68
XPAP23025 LINC01568-207ENST00000641790 1380 ntBASIC19.29■□□□□ 0.68
XPAP23025 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.29■□□□□ 0.68
XPAP23025 TREX1-205ENST00000625293 1783 ntBASIC19.29■□□□□ 0.68
XPAP23025 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
XPAP23025 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.29■□□□□ 0.68
XPAP23025 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
XPAP23025 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
XPAP23025 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.28■□□□□ 0.68
XPAP23025 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.28■□□□□ 0.68
XPAP23025 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.28■□□□□ 0.68
XPAP23025 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.28■□□□□ 0.68
XPAP23025 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
XPAP23025 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.28■□□□□ 0.68
XPAP23025 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.28■□□□□ 0.68
XPAP23025 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.28■□□□□ 0.68
XPAP23025 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.28■□□□□ 0.68
XPAP23025 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.28■□□□□ 0.68
XPAP23025 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.28■□□□□ 0.68
XPAP23025 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
XPAP23025 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XPAP23025 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
XPAP23025 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
XPAP23025 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
XPAP23025 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.27■□□□□ 0.68
XPAP23025 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.27■□□□□ 0.68
XPAP23025 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
XPAP23025 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.27■□□□□ 0.68
XPAP23025 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
XPAP23025 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
XPAP23025 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.27■□□□□ 0.68
XPAP23025 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
XPAP23025 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
XPAP23025 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
XPAP23025 AC073130.3-201ENST00000624389 2278 ntBASIC19.27■□□□□ 0.68
XPAP23025 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
XPAP23025 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
XPAP23025 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
XPAP23025 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
XPAP23025 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.26■□□□□ 0.67
XPAP23025 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XPAP23025 AC096733.2-201ENST00000609937 1394 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms