Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.76■□□□□ 0.27
UBCP0CG48 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.76■□□□□ 0.27
UBCP0CG48 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.76■□□□□ 0.27
UBCP0CG48 Z98044.1-201ENST00000632503 1764 ntBASIC16.76■□□□□ 0.27
UBCP0CG48 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBCP0CG48 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.76■□□□□ 0.27
UBCP0CG48 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBCP0CG48 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.75■□□□□ 0.27
UBCP0CG48 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UBCP0CG48 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.75■□□□□ 0.27
UBCP0CG48 TUBB8P6-201ENST00000436895 1288 ntBASIC16.75■□□□□ 0.27
UBCP0CG48 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
UBCP0CG48 PNMA6B-201ENST00000538162 1200 ntBASIC16.75■□□□□ 0.27
UBCP0CG48 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.75■□□□□ 0.27
UBCP0CG48 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.75■□□□□ 0.27
UBCP0CG48 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.75■□□□□ 0.27
UBCP0CG48 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.75■□□□□ 0.27
UBCP0CG48 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
UBCP0CG48 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.75■□□□□ 0.27
UBCP0CG48 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
UBCP0CG48 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.75■□□□□ 0.27
UBCP0CG48 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBCP0CG48 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 AL031598.1-201ENST00000561511 1773 ntBASIC16.74■□□□□ 0.27
UBCP0CG48 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.74■□□□□ 0.27
UBCP0CG48 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.74■□□□□ 0.27
UBCP0CG48 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBCP0CG48 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBCP0CG48 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.74■□□□□ 0.27
UBCP0CG48 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.74■□□□□ 0.27
UBCP0CG48 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 AL121829.2-201ENST00000620908 328 ntBASIC16.74■□□□□ 0.27
UBCP0CG48 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBCP0CG48 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBCP0CG48 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBCP0CG48 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBCP0CG48 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.74■□□□□ 0.27
UBCP0CG48 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms