Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TPM2P07951 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TPM2P07951 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM2P07951 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TPM2P07951 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM2P07951 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.7■■□□□ 1.06
TPM2P07951 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM2P07951 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM2P07951 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM2P07951 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TPM2P07951 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 PHGDH-210ENST00000641115 1638 ntBASIC21.69■■□□□ 1.06
TPM2P07951 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TPM2P07951 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.69■■□□□ 1.06
TPM2P07951 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.69■■□□□ 1.06
TPM2P07951 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.69■■□□□ 1.06
TPM2P07951 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.69■■□□□ 1.06
TPM2P07951 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.69■■□□□ 1.06
TPM2P07951 OR10C1-204ENST00000622521 1039 ntBASIC21.69■■□□□ 1.06
TPM2P07951 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.69■■□□□ 1.06
TPM2P07951 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.69■■□□□ 1.06
TPM2P07951 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TPM2P07951 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.69■■□□□ 1.06
TPM2P07951 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.69■■□□□ 1.06
TPM2P07951 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TPM2P07951 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TPM2P07951 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.69■■□□□ 1.06
TPM2P07951 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM2P07951 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
TPM2P07951 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.68■■□□□ 1.06
TPM2P07951 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.68■■□□□ 1.06
TPM2P07951 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM2P07951 AC006015.1-201ENST00000429970 570 ntBASIC21.68■■□□□ 1.06
TPM2P07951 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 AC023632.3-201ENST00000521633 145 ntBASIC21.68■■□□□ 1.06
TPM2P07951 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TPM2P07951 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.68■■□□□ 1.06
TPM2P07951 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM2P07951 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM2P07951 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
TPM2P07951 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM2P07951 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.67■■□□□ 1.06
TPM2P07951 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.67■■□□□ 1.06
TPM2P07951 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.67■■□□□ 1.06
TPM2P07951 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.67■■□□□ 1.06
TPM2P07951 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.67■■□□□ 1.06
TPM2P07951 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TPM2P07951 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.67■■□□□ 1.06
TPM2P07951 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TPM2P07951 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.67■■□□□ 1.06
TPM2P07951 C2orf69P4-201ENST00000565394 541 ntBASIC21.67■■□□□ 1.06
TPM2P07951 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.67■■□□□ 1.06
TPM2P07951 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TPM2P07951 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM2P07951 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.67■■□□□ 1.06
TPM2P07951 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM2P07951 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.66■■□□□ 1.06
TPM2P07951 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms