Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.89■□□□□ 0.29
SGCEO43556 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.89■□□□□ 0.29
SGCEO43556 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.89■□□□□ 0.29
SGCEO43556 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.89■□□□□ 0.29
SGCEO43556 AC133681.1-201ENST00000465482 601 ntBASIC16.89■□□□□ 0.29
SGCEO43556 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCEO43556 AC110285.5-201ENST00000611501 352 ntBASIC16.89■□□□□ 0.29
SGCEO43556 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SGCEO43556 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCEO43556 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
SGCEO43556 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SGCEO43556 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.89■□□□□ 0.29
SGCEO43556 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCEO43556 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
SGCEO43556 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.89■□□□□ 0.29
SGCEO43556 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SGCEO43556 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.88■□□□□ 0.29
SGCEO43556 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 HCG11-201ENST00000411553 5696 ntBASIC16.88■□□□□ 0.29
SGCEO43556 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SGCEO43556 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 AC090340.1-201ENST00000620778 4980 ntBASIC16.88■□□□□ 0.29
SGCEO43556 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SGCEO43556 SDHAP1-207ENST00000440850 2000 ntBASIC16.88■□□□□ 0.29
SGCEO43556 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SGCEO43556 C1QBPP2-201ENST00000528754 825 ntBASIC16.88■□□□□ 0.29
SGCEO43556 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.88■□□□□ 0.29
SGCEO43556 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.88■□□□□ 0.29
SGCEO43556 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SGCEO43556 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
SGCEO43556 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.88■□□□□ 0.29
SGCEO43556 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
SGCEO43556 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.88■□□□□ 0.29
SGCEO43556 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCEO43556 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.87■□□□□ 0.29
SGCEO43556 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.87■□□□□ 0.29
SGCEO43556 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.87■□□□□ 0.29
SGCEO43556 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.87■□□□□ 0.29
SGCEO43556 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 FZD10-202ENST00000539839 3282 ntBASIC16.87■□□□□ 0.29
SGCEO43556 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SGCEO43556 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.87■□□□□ 0.29
SGCEO43556 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.87■□□□□ 0.29
SGCEO43556 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.87■□□□□ 0.29
SGCEO43556 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.87■□□□□ 0.29
SGCEO43556 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.87■□□□□ 0.29
SGCEO43556 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.87■□□□□ 0.29
SGCEO43556 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.87■□□□□ 0.29
SGCEO43556 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.87■□□□□ 0.29
SGCEO43556 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.87■□□□□ 0.29
SGCEO43556 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.87■□□□□ 0.29
SGCEO43556 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.87■□□□□ 0.29
SGCEO43556 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SGCEO43556 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.87■□□□□ 0.29
SGCEO43556 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
SGCEO43556 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SGCEO43556 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SGCEO43556 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.86■□□□□ 0.29
SGCEO43556 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SGCEO43556 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.86■□□□□ 0.29
SGCEO43556 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SGCEO43556 TSPY20P-201ENST00000450910 630 ntBASIC16.86■□□□□ 0.29
SGCEO43556 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SGCEO43556 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms