Protein–RNA interactions for Protein: H3BPC8

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 53 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BPC8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.68□□□□□ -0.7
H3BPC8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
H3BPC8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC10.68□□□□□ -0.7
H3BPC8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
H3BPC8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.68□□□□□ -0.7
H3BPC8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H3BPC8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC10.68□□□□□ -0.7
H3BPC8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
H3BPC8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
H3BPC8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
H3BPC8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
H3BPC8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC10.67□□□□□ -0.7
H3BPC8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC10.67□□□□□ -0.7
H3BPC8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.67□□□□□ -0.7
H3BPC8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC10.67□□□□□ -0.7
H3BPC8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.67□□□□□ -0.7
H3BPC8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
H3BPC8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3BPC8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
H3BPC8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC10.66□□□□□ -0.7
H3BPC8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
H3BPC8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC10.66□□□□□ -0.7
H3BPC8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC10.66□□□□□ -0.7
H3BPC8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC10.66□□□□□ -0.7
H3BPC8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
H3BPC8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 IRX1P1-201ENST00000438849 1838 ntBASIC10.66□□□□□ -0.7
H3BPC8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC10.66□□□□□ -0.7
H3BPC8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
H3BPC8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
H3BPC8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC10.66□□□□□ -0.7
H3BPC8 AC016575.1-201ENST00000607026 382 ntBASIC10.66□□□□□ -0.7
H3BPC8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC10.66□□□□□ -0.7
H3BPC8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
H3BPC8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3BPC8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms