Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TNFRSF11AQ9Y6Q6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
TNFRSF11AQ9Y6Q6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.52■■■□□ 2.64
TNFRSF11AQ9Y6Q6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
TNFRSF11AQ9Y6Q6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TNFRSF11AQ9Y6Q6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.51■■■□□ 2.63
TNFRSF11AQ9Y6Q6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.51■■■□□ 2.63
TNFRSF11AQ9Y6Q6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TNFRSF11AQ9Y6Q6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
TNFRSF11AQ9Y6Q6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.49■■■□□ 2.63
TNFRSF11AQ9Y6Q6 AC110285.7-201ENST00000624417 1536 ntBASIC31.49■■■□□ 2.63
TNFRSF11AQ9Y6Q6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TNFRSF11AQ9Y6Q6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.48■■■□□ 2.63
TNFRSF11AQ9Y6Q6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.47■■■□□ 2.63
TNFRSF11AQ9Y6Q6 MIR4449-201ENST00000578365 66 ntBASIC31.46■■■□□ 2.63
TNFRSF11AQ9Y6Q6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
TNFRSF11AQ9Y6Q6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TNFRSF11AQ9Y6Q6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TNFRSF11AQ9Y6Q6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TNFRSF11AQ9Y6Q6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TNFRSF11AQ9Y6Q6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TNFRSF11AQ9Y6Q6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.44■■■□□ 2.62
TNFRSF11AQ9Y6Q6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.44■■■□□ 2.62
TNFRSF11AQ9Y6Q6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TNFRSF11AQ9Y6Q6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
TNFRSF11AQ9Y6Q6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TNFRSF11AQ9Y6Q6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.42■■■□□ 2.62
TNFRSF11AQ9Y6Q6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TNFRSF11AQ9Y6Q6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TNFRSF11AQ9Y6Q6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TNFRSF11AQ9Y6Q6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
TNFRSF11AQ9Y6Q6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
TNFRSF11AQ9Y6Q6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TNFRSF11AQ9Y6Q6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.38■■■□□ 2.61
TNFRSF11AQ9Y6Q6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNFRSF11AQ9Y6Q6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNFRSF11AQ9Y6Q6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.37■■■□□ 2.61
TNFRSF11AQ9Y6Q6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
TNFRSF11AQ9Y6Q6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.37■■■□□ 2.61
TNFRSF11AQ9Y6Q6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TNFRSF11AQ9Y6Q6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
TNFRSF11AQ9Y6Q6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TNFRSF11AQ9Y6Q6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNFRSF11AQ9Y6Q6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TNFRSF11AQ9Y6Q6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TNFRSF11AQ9Y6Q6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TNFRSF11AQ9Y6Q6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.34■■■□□ 2.61
TNFRSF11AQ9Y6Q6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TNFRSF11AQ9Y6Q6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TNFRSF11AQ9Y6Q6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
TNFRSF11AQ9Y6Q6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
TNFRSF11AQ9Y6Q6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
TNFRSF11AQ9Y6Q6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.32■■■□□ 2.6
TNFRSF11AQ9Y6Q6 DRD5P2-201ENST00000421395 2012 ntBASIC31.31■■■□□ 2.6
TNFRSF11AQ9Y6Q6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TNFRSF11AQ9Y6Q6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TNFRSF11AQ9Y6Q6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
TNFRSF11AQ9Y6Q6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TNFRSF11AQ9Y6Q6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TNFRSF11AQ9Y6Q6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TNFRSF11AQ9Y6Q6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
TNFRSF11AQ9Y6Q6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.28■■■□□ 2.6
TNFRSF11AQ9Y6Q6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TNFRSF11AQ9Y6Q6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TNFRSF11AQ9Y6Q6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TNFRSF11AQ9Y6Q6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TNFRSF11AQ9Y6Q6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TNFRSF11AQ9Y6Q6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
TNFRSF11AQ9Y6Q6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
TNFRSF11AQ9Y6Q6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.26■■■□□ 2.59
TNFRSF11AQ9Y6Q6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TNFRSF11AQ9Y6Q6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.25■■■□□ 2.59
TNFRSF11AQ9Y6Q6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
TNFRSF11AQ9Y6Q6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
TNFRSF11AQ9Y6Q6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.24■■■□□ 2.59
TNFRSF11AQ9Y6Q6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
TNFRSF11AQ9Y6Q6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.23■■■□□ 2.59
TNFRSF11AQ9Y6Q6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
TNFRSF11AQ9Y6Q6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TNFRSF11AQ9Y6Q6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
TNFRSF11AQ9Y6Q6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TNFRSF11AQ9Y6Q6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TNFRSF11AQ9Y6Q6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TNFRSF11AQ9Y6Q6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TNFRSF11AQ9Y6Q6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
TNFRSF11AQ9Y6Q6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.2■■■□□ 2.59
TNFRSF11AQ9Y6Q6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.2■■■□□ 2.59
TNFRSF11AQ9Y6Q6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.2■■■□□ 2.59
TNFRSF11AQ9Y6Q6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.2■■■□□ 2.59
TNFRSF11AQ9Y6Q6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
TNFRSF11AQ9Y6Q6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
TNFRSF11AQ9Y6Q6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
TNFRSF11AQ9Y6Q6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TNFRSF11AQ9Y6Q6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
TNFRSF11AQ9Y6Q6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.19■■■□□ 2.58
TNFRSF11AQ9Y6Q6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
TNFRSF11AQ9Y6Q6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.18■■■□□ 2.58
TNFRSF11AQ9Y6Q6 AP002414.2-202ENST00000590929 1450 ntBASIC31.18■■■□□ 2.58
TNFRSF11AQ9Y6Q6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TNFRSF11AQ9Y6Q6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms