Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.63■■■□□ 2.17
PCDHA2Q9Y5H9 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.63■■■□□ 2.17
PCDHA2Q9Y5H9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.63■■■□□ 2.17
PCDHA2Q9Y5H9 AP004833.2-201ENST00000532228 1454 ntBASIC28.62■■■□□ 2.17
PCDHA2Q9Y5H9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.62■■■□□ 2.17
PCDHA2Q9Y5H9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA2Q9Y5H9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.61■■■□□ 2.17
PCDHA2Q9Y5H9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
PCDHA2Q9Y5H9 WHAMMP2-203ENST00000563942 1603 ntBASIC28.61■■■□□ 2.17
PCDHA2Q9Y5H9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA2Q9Y5H9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA2Q9Y5H9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
PCDHA2Q9Y5H9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
PCDHA2Q9Y5H9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
PCDHA2Q9Y5H9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA2Q9Y5H9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
PCDHA2Q9Y5H9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA2Q9Y5H9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.58■■■□□ 2.17
PCDHA2Q9Y5H9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.58■■■□□ 2.17
PCDHA2Q9Y5H9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA2Q9Y5H9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.58■■■□□ 2.17
PCDHA2Q9Y5H9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHA2Q9Y5H9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
PCDHA2Q9Y5H9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.57■■■□□ 2.16
PCDHA2Q9Y5H9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHA2Q9Y5H9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHA2Q9Y5H9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHA2Q9Y5H9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHA2Q9Y5H9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.56■■■□□ 2.16
PCDHA2Q9Y5H9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.56■■■□□ 2.16
PCDHA2Q9Y5H9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.55■■■□□ 2.16
PCDHA2Q9Y5H9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHA2Q9Y5H9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHA2Q9Y5H9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.55■■■□□ 2.16
PCDHA2Q9Y5H9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
PCDHA2Q9Y5H9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHA2Q9Y5H9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.54■■■□□ 2.16
PCDHA2Q9Y5H9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHA2Q9Y5H9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHA2Q9Y5H9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.53■■■□□ 2.16
PCDHA2Q9Y5H9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA2Q9Y5H9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA2Q9Y5H9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PCDHA2Q9Y5H9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PCDHA2Q9Y5H9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.51■■■□□ 2.15
PCDHA2Q9Y5H9 DRD5P2-201ENST00000421395 2012 ntBASIC28.5■■■□□ 2.15
PCDHA2Q9Y5H9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA2Q9Y5H9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHA2Q9Y5H9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
PCDHA2Q9Y5H9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHA2Q9Y5H9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
PCDHA2Q9Y5H9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.48■■■□□ 2.15
PCDHA2Q9Y5H9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.48■■■□□ 2.15
PCDHA2Q9Y5H9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHA2Q9Y5H9 AC008813.1-201ENST00000536597 885 ntBASIC28.46■■■□□ 2.15
PCDHA2Q9Y5H9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PCDHA2Q9Y5H9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA2Q9Y5H9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PCDHA2Q9Y5H9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PCDHA2Q9Y5H9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.45■■■□□ 2.14
PCDHA2Q9Y5H9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.45■■■□□ 2.14
PCDHA2Q9Y5H9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.44■■■□□ 2.14
PCDHA2Q9Y5H9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHA2Q9Y5H9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHA2Q9Y5H9 AC100797.4-201ENST00000631653 1827 ntBASIC28.42■■■□□ 2.14
PCDHA2Q9Y5H9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.42■■■□□ 2.14
PCDHA2Q9Y5H9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA2Q9Y5H9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.41■■■□□ 2.14
PCDHA2Q9Y5H9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.41■■■□□ 2.14
PCDHA2Q9Y5H9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.41■■■□□ 2.14
PCDHA2Q9Y5H9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA2Q9Y5H9 AC110285.7-201ENST00000624417 1536 ntBASIC28.41■■■□□ 2.14
PCDHA2Q9Y5H9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
PCDHA2Q9Y5H9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA2Q9Y5H9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.4■■■□□ 2.14
PCDHA2Q9Y5H9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA2Q9Y5H9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
PCDHA2Q9Y5H9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA2Q9Y5H9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHA2Q9Y5H9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
PCDHA2Q9Y5H9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.39■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms