Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.78■■□□□ 1.72
PCDHGC4Q9Y5F7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDHGC4Q9Y5F7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGC4Q9Y5F7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.77■■□□□ 1.72
PCDHGC4Q9Y5F7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.77■■□□□ 1.72
PCDHGC4Q9Y5F7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGC4Q9Y5F7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHGC4Q9Y5F7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC4Q9Y5F7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC4Q9Y5F7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC4Q9Y5F7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC4Q9Y5F7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC4Q9Y5F7 AC110285.7-201ENST00000624417 1536 ntBASIC25.75■■□□□ 1.71
PCDHGC4Q9Y5F7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGC4Q9Y5F7 AC016575.1-201ENST00000607026 382 ntBASIC25.75■■□□□ 1.71
PCDHGC4Q9Y5F7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC4Q9Y5F7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC4Q9Y5F7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
PCDHGC4Q9Y5F7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHGC4Q9Y5F7 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHGC4Q9Y5F7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDHGC4Q9Y5F7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGC4Q9Y5F7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
PCDHGC4Q9Y5F7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGC4Q9Y5F7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHGC4Q9Y5F7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGC4Q9Y5F7 DRD5P2-201ENST00000421395 2012 ntBASIC25.71■■□□□ 1.71
PCDHGC4Q9Y5F7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGC4Q9Y5F7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGC4Q9Y5F7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGC4Q9Y5F7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGC4Q9Y5F7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGC4Q9Y5F7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGC4Q9Y5F7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
PCDHGC4Q9Y5F7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGC4Q9Y5F7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGC4Q9Y5F7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHGC4Q9Y5F7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.67■■□□□ 1.7
PCDHGC4Q9Y5F7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGC4Q9Y5F7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGC4Q9Y5F7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGC4Q9Y5F7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PCDHGC4Q9Y5F7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGC4Q9Y5F7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGC4Q9Y5F7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGC4Q9Y5F7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGC4Q9Y5F7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGC4Q9Y5F7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHGC4Q9Y5F7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHGC4Q9Y5F7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHGC4Q9Y5F7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGC4Q9Y5F7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHGC4Q9Y5F7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHGC4Q9Y5F7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGC4Q9Y5F7 HLA-V-202ENST00000446817 847 ntBASIC25.63■■□□□ 1.69
PCDHGC4Q9Y5F7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGC4Q9Y5F7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHGC4Q9Y5F7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHGC4Q9Y5F7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGC4Q9Y5F7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHGC4Q9Y5F7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGC4Q9Y5F7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PCDHGC4Q9Y5F7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 AP002414.2-202ENST00000590929 1450 ntBASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGC4Q9Y5F7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGC4Q9Y5F7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
PCDHGC4Q9Y5F7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PCDHGC4Q9Y5F7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDHGC4Q9Y5F7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDHGC4Q9Y5F7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PCDHGC4Q9Y5F7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGC4Q9Y5F7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGC4Q9Y5F7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGC4Q9Y5F7 MIR639-201ENST00000384974 98 ntBASIC25.59■■□□□ 1.69
PCDHGC4Q9Y5F7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGC4Q9Y5F7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGC4Q9Y5F7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PCDHGC4Q9Y5F7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGC4Q9Y5F7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHGC4Q9Y5F7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHGC4Q9Y5F7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
PCDHGC4Q9Y5F7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHGC4Q9Y5F7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGC4Q9Y5F7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGC4Q9Y5F7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGC4Q9Y5F7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGC4Q9Y5F7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGC4Q9Y5F7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGC4Q9Y5F7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGC4Q9Y5F7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PCDHGC4Q9Y5F7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDHGC4Q9Y5F7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHGC4Q9Y5F7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms