Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC142086.6-201ENST00000621154 1765 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L13-201ENST00000554103 1267 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L15-201ENST00000611059 1267 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L23-201ENST00000615195 1269 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L24-201ENST00000617576 1269 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L22-201ENST00000618238 1269 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L20-201ENST00000619712 1269 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L21-201ENST00000622058 1269 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L10-201ENST00000622460 1267 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 DUX4L25-201ENST00000624915 1269 ntBASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHB1Q9Y5F3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB1Q9Y5F3 AC135983.2-203ENST00000454486 1613 ntBASIC25.41■■□□□ 1.66
PCDHB1Q9Y5F3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB1Q9Y5F3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB1Q9Y5F3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB1Q9Y5F3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.41■■□□□ 1.66
PCDHB1Q9Y5F3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB1Q9Y5F3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB1Q9Y5F3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB1Q9Y5F3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.4■■□□□ 1.66
PCDHB1Q9Y5F3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHB1Q9Y5F3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.39■■□□□ 1.66
PCDHB1Q9Y5F3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHB1Q9Y5F3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHB1Q9Y5F3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB1Q9Y5F3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB1Q9Y5F3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB1Q9Y5F3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB1Q9Y5F3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
PCDHB1Q9Y5F3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
PCDHB1Q9Y5F3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB1Q9Y5F3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.38■■□□□ 1.65
PCDHB1Q9Y5F3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB1Q9Y5F3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB1Q9Y5F3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHB1Q9Y5F3 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHB1Q9Y5F3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
PCDHB1Q9Y5F3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB1Q9Y5F3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB1Q9Y5F3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB1Q9Y5F3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB1Q9Y5F3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB1Q9Y5F3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHB1Q9Y5F3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHB1Q9Y5F3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.35■■□□□ 1.65
PCDHB1Q9Y5F3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
PCDHB1Q9Y5F3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHB1Q9Y5F3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.35■■□□□ 1.65
PCDHB1Q9Y5F3 AC100797.4-201ENST00000631653 1827 ntBASIC25.35■■□□□ 1.65
PCDHB1Q9Y5F3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHB1Q9Y5F3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHB1Q9Y5F3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDHB1Q9Y5F3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHB1Q9Y5F3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHB1Q9Y5F3 WHAMMP2-203ENST00000563942 1603 ntBASIC25.34■■□□□ 1.65
PCDHB1Q9Y5F3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHB1Q9Y5F3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHB1Q9Y5F3 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHB1Q9Y5F3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHB1Q9Y5F3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHB1Q9Y5F3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHB1Q9Y5F3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.31■■□□□ 1.64
PCDHB1Q9Y5F3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHB1Q9Y5F3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHB1Q9Y5F3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHB1Q9Y5F3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.3■■□□□ 1.64
PCDHB1Q9Y5F3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHB1Q9Y5F3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDHB1Q9Y5F3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHB1Q9Y5F3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHB1Q9Y5F3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHB1Q9Y5F3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHB1Q9Y5F3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.29■■□□□ 1.64
PCDHB1Q9Y5F3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHB1Q9Y5F3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHB1Q9Y5F3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHB1Q9Y5F3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHB1Q9Y5F3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PCDHB1Q9Y5F3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.27■■□□□ 1.64
PCDHB1Q9Y5F3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHB1Q9Y5F3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHB1Q9Y5F3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PCDHB1Q9Y5F3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
PCDHB1Q9Y5F3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB1Q9Y5F3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDHB1Q9Y5F3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB1Q9Y5F3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB1Q9Y5F3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB1Q9Y5F3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHB1Q9Y5F3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHB1Q9Y5F3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHB1Q9Y5F3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHB1Q9Y5F3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
PCDHB1Q9Y5F3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHB1Q9Y5F3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PCDHB1Q9Y5F3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHB1Q9Y5F3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHB1Q9Y5F3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms