Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CHMP2BQ9UQN3 AC005559.1-201ENST00000589661 871 ntBASIC25.78■■□□□ 1.72
CHMP2BQ9UQN3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.78■■□□□ 1.72
CHMP2BQ9UQN3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.78■■□□□ 1.72
CHMP2BQ9UQN3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP2BQ9UQN3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP2BQ9UQN3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP2BQ9UQN3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHMP2BQ9UQN3 AP002414.2-202ENST00000590929 1450 ntBASIC25.77■■□□□ 1.72
CHMP2BQ9UQN3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CHMP2BQ9UQN3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
CHMP2BQ9UQN3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
CHMP2BQ9UQN3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.76■■□□□ 1.71
CHMP2BQ9UQN3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.76■■□□□ 1.71
CHMP2BQ9UQN3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.76■■□□□ 1.71
CHMP2BQ9UQN3 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.75■■□□□ 1.71
CHMP2BQ9UQN3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CHMP2BQ9UQN3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.74■■□□□ 1.71
CHMP2BQ9UQN3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.74■■□□□ 1.71
CHMP2BQ9UQN3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHMP2BQ9UQN3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHMP2BQ9UQN3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.73■■□□□ 1.71
CHMP2BQ9UQN3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
CHMP2BQ9UQN3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.73■■□□□ 1.71
CHMP2BQ9UQN3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHMP2BQ9UQN3 AC135983.2-203ENST00000454486 1613 ntBASIC25.72■■□□□ 1.71
CHMP2BQ9UQN3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHMP2BQ9UQN3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
CHMP2BQ9UQN3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.71■■□□□ 1.71
CHMP2BQ9UQN3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.71■■□□□ 1.71
CHMP2BQ9UQN3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHMP2BQ9UQN3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
CHMP2BQ9UQN3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP2BQ9UQN3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.7■■□□□ 1.7
CHMP2BQ9UQN3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP2BQ9UQN3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP2BQ9UQN3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP2BQ9UQN3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP2BQ9UQN3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP2BQ9UQN3 WHAMMP2-203ENST00000563942 1603 ntBASIC25.68■■□□□ 1.7
CHMP2BQ9UQN3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.68■■□□□ 1.7
CHMP2BQ9UQN3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.68■■□□□ 1.7
CHMP2BQ9UQN3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHMP2BQ9UQN3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CHMP2BQ9UQN3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP2BQ9UQN3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
CHMP2BQ9UQN3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP2BQ9UQN3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CHMP2BQ9UQN3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.66■■□□□ 1.7
CHMP2BQ9UQN3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP2BQ9UQN3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.66■■□□□ 1.7
CHMP2BQ9UQN3 MIR6090-201ENST00000622481 60 ntBASIC25.66■■□□□ 1.7
CHMP2BQ9UQN3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CHMP2BQ9UQN3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP2BQ9UQN3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP2BQ9UQN3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.65■■□□□ 1.7
CHMP2BQ9UQN3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP2BQ9UQN3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP2BQ9UQN3 AC108673.1-201ENST00000510422 1159 ntBASIC25.65■■□□□ 1.7
CHMP2BQ9UQN3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP2BQ9UQN3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP2BQ9UQN3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP2BQ9UQN3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP2BQ9UQN3 DUX4L28-201ENST00000623687 678 ntBASIC25.63■■□□□ 1.69
CHMP2BQ9UQN3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.63■■□□□ 1.69
CHMP2BQ9UQN3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP2BQ9UQN3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP2BQ9UQN3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP2BQ9UQN3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP2BQ9UQN3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP2BQ9UQN3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.62■■□□□ 1.69
CHMP2BQ9UQN3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP2BQ9UQN3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.61■■□□□ 1.69
CHMP2BQ9UQN3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP2BQ9UQN3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.6■■□□□ 1.69
CHMP2BQ9UQN3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP2BQ9UQN3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP2BQ9UQN3 AC018358.1-201ENST00000631079 1402 ntBASIC25.59■■□□□ 1.69
CHMP2BQ9UQN3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP2BQ9UQN3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.58■■□□□ 1.69
CHMP2BQ9UQN3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHMP2BQ9UQN3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.58■■□□□ 1.69
CHMP2BQ9UQN3 LINC00273-201ENST00000539813 1452 ntBASIC25.58■■□□□ 1.69
CHMP2BQ9UQN3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.58■■□□□ 1.68
CHMP2BQ9UQN3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CHMP2BQ9UQN3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP2BQ9UQN3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP2BQ9UQN3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP2BQ9UQN3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.57■■□□□ 1.68
CHMP2BQ9UQN3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP2BQ9UQN3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CHMP2BQ9UQN3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CHMP2BQ9UQN3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP2BQ9UQN3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.56■■□□□ 1.68
CHMP2BQ9UQN3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CHMP2BQ9UQN3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.56■■□□□ 1.68
CHMP2BQ9UQN3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CHMP2BQ9UQN3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CHMP2BQ9UQN3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHMP2BQ9UQN3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms