Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3ALQ9UNE2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3ALQ9UNE2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPH3ALQ9UNE2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RPH3ALQ9UNE2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RPH3ALQ9UNE2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RPH3ALQ9UNE2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3ALQ9UNE2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RPH3ALQ9UNE2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3ALQ9UNE2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3ALQ9UNE2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPH3ALQ9UNE2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RPH3ALQ9UNE2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.5■□□□□ 0.71
RPH3ALQ9UNE2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3ALQ9UNE2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3ALQ9UNE2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.5■□□□□ 0.71
RPH3ALQ9UNE2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3ALQ9UNE2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.5■□□□□ 0.71
RPH3ALQ9UNE2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3ALQ9UNE2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3ALQ9UNE2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.49■□□□□ 0.71
RPH3ALQ9UNE2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.49■□□□□ 0.71
RPH3ALQ9UNE2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
RPH3ALQ9UNE2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3ALQ9UNE2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.49■□□□□ 0.71
RPH3ALQ9UNE2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3ALQ9UNE2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPH3ALQ9UNE2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.48■□□□□ 0.71
RPH3ALQ9UNE2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPH3ALQ9UNE2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.48■□□□□ 0.71
RPH3ALQ9UNE2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPH3ALQ9UNE2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPH3ALQ9UNE2 LINC01003-201ENST00000564834 1764 ntBASIC19.47■□□□□ 0.71
RPH3ALQ9UNE2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPH3ALQ9UNE2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPH3ALQ9UNE2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPH3ALQ9UNE2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPH3ALQ9UNE2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPH3ALQ9UNE2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPH3ALQ9UNE2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPH3ALQ9UNE2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPH3ALQ9UNE2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPH3ALQ9UNE2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPH3ALQ9UNE2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPH3ALQ9UNE2 AP004833.2-201ENST00000532228 1454 ntBASIC19.46■□□□□ 0.71
RPH3ALQ9UNE2 AC127502.1-201ENST00000399971 1502 ntBASIC19.45■□□□□ 0.7
RPH3ALQ9UNE2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3ALQ9UNE2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3ALQ9UNE2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.44■□□□□ 0.7
RPH3ALQ9UNE2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3ALQ9UNE2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RPH3ALQ9UNE2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPH3ALQ9UNE2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3ALQ9UNE2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.43■□□□□ 0.7
RPH3ALQ9UNE2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3ALQ9UNE2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3ALQ9UNE2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPH3ALQ9UNE2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3ALQ9UNE2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3ALQ9UNE2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.42■□□□□ 0.7
RPH3ALQ9UNE2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPH3ALQ9UNE2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.42■□□□□ 0.7
RPH3ALQ9UNE2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RPH3ALQ9UNE2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RPH3ALQ9UNE2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3ALQ9UNE2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.41■□□□□ 0.7
RPH3ALQ9UNE2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3ALQ9UNE2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.41■□□□□ 0.7
RPH3ALQ9UNE2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3ALQ9UNE2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3ALQ9UNE2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPH3ALQ9UNE2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.41■□□□□ 0.7
RPH3ALQ9UNE2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 AL449106.1-201ENST00000608517 1980 ntBASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3ALQ9UNE2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPH3ALQ9UNE2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RPH3ALQ9UNE2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.39■□□□□ 0.69
RPH3ALQ9UNE2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RPH3ALQ9UNE2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.39■□□□□ 0.69
RPH3ALQ9UNE2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPH3ALQ9UNE2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPH3ALQ9UNE2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPH3ALQ9UNE2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms