Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TREM2Q9NZC2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.78■■□□□ 1.08
TREM2Q9NZC2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.78■■□□□ 1.08
TREM2Q9NZC2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.78■■□□□ 1.08
TREM2Q9NZC2 AC135983.2-203ENST00000454486 1613 ntBASIC21.77■■□□□ 1.08
TREM2Q9NZC2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TREM2Q9NZC2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.77■■□□□ 1.08
TREM2Q9NZC2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TREM2Q9NZC2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TREM2Q9NZC2 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.76■■□□□ 1.07
TREM2Q9NZC2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TREM2Q9NZC2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TREM2Q9NZC2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.76■■□□□ 1.07
TREM2Q9NZC2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.75■■□□□ 1.07
TREM2Q9NZC2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TREM2Q9NZC2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TREM2Q9NZC2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TREM2Q9NZC2 AP004833.2-201ENST00000532228 1454 ntBASIC21.75■■□□□ 1.07
TREM2Q9NZC2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TREM2Q9NZC2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.75■■□□□ 1.07
TREM2Q9NZC2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TREM2Q9NZC2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
TREM2Q9NZC2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TREM2Q9NZC2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L13-201ENST00000554103 1267 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L15-201ENST00000611059 1267 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L23-201ENST00000615195 1269 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L24-201ENST00000617576 1269 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L22-201ENST00000618238 1269 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L20-201ENST00000619712 1269 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L21-201ENST00000622058 1269 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L10-201ENST00000622460 1267 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 DUX4L25-201ENST00000624915 1269 ntBASIC21.74■■□□□ 1.07
TREM2Q9NZC2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TREM2Q9NZC2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TREM2Q9NZC2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TREM2Q9NZC2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
TREM2Q9NZC2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TREM2Q9NZC2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TREM2Q9NZC2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TREM2Q9NZC2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TREM2Q9NZC2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.71■■□□□ 1.07
TREM2Q9NZC2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.71■■□□□ 1.07
TREM2Q9NZC2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TREM2Q9NZC2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TREM2Q9NZC2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TREM2Q9NZC2 DRD5P2-201ENST00000421395 2012 ntBASIC21.69■■□□□ 1.06
TREM2Q9NZC2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
TREM2Q9NZC2 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.69■■□□□ 1.06
TREM2Q9NZC2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.69■■□□□ 1.06
TREM2Q9NZC2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TREM2Q9NZC2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.69■■□□□ 1.06
TREM2Q9NZC2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TREM2Q9NZC2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TREM2Q9NZC2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TREM2Q9NZC2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.68■■□□□ 1.06
TREM2Q9NZC2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TREM2Q9NZC2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TREM2Q9NZC2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.67■■□□□ 1.06
TREM2Q9NZC2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TREM2Q9NZC2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TREM2Q9NZC2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.67■■□□□ 1.06
TREM2Q9NZC2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TREM2Q9NZC2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
TREM2Q9NZC2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TREM2Q9NZC2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TREM2Q9NZC2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.66■■□□□ 1.06
TREM2Q9NZC2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.66■■□□□ 1.06
TREM2Q9NZC2 AC100797.4-201ENST00000631653 1827 ntBASIC21.65■■□□□ 1.06
TREM2Q9NZC2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TREM2Q9NZC2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.65■■□□□ 1.06
TREM2Q9NZC2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.65■■□□□ 1.06
TREM2Q9NZC2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TREM2Q9NZC2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
TREM2Q9NZC2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.64■■□□□ 1.05
TREM2Q9NZC2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.64■■□□□ 1.05
TREM2Q9NZC2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.63■■□□□ 1.05
TREM2Q9NZC2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TREM2Q9NZC2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.63■■□□□ 1.05
TREM2Q9NZC2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.63■■□□□ 1.05
TREM2Q9NZC2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TREM2Q9NZC2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TREM2Q9NZC2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TREM2Q9NZC2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TREM2Q9NZC2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TREM2Q9NZC2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TREM2Q9NZC2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TREM2Q9NZC2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.61■■□□□ 1.05
TREM2Q9NZC2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TREM2Q9NZC2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.61■■□□□ 1.05
TREM2Q9NZC2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TREM2Q9NZC2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TREM2Q9NZC2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TREM2Q9NZC2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TREM2Q9NZC2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.6■■□□□ 1.05
TREM2Q9NZC2 AC110285.7-201ENST00000624417 1536 ntBASIC21.6■■□□□ 1.05
TREM2Q9NZC2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.6■■□□□ 1.05
TREM2Q9NZC2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TREM2Q9NZC2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TREM2Q9NZC2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms