Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.29■□□□□ 0.84
GAR1Q9NY12 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GAR1Q9NY12 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
GAR1Q9NY12 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
GAR1Q9NY12 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GAR1Q9NY12 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.28■□□□□ 0.84
GAR1Q9NY12 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GAR1Q9NY12 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GAR1Q9NY12 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GAR1Q9NY12 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GAR1Q9NY12 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GAR1Q9NY12 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.27■□□□□ 0.84
GAR1Q9NY12 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GAR1Q9NY12 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.83
GAR1Q9NY12 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
GAR1Q9NY12 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.26■□□□□ 0.83
GAR1Q9NY12 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.26■□□□□ 0.83
GAR1Q9NY12 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GAR1Q9NY12 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.25■□□□□ 0.83
GAR1Q9NY12 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GAR1Q9NY12 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GAR1Q9NY12 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
GAR1Q9NY12 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GAR1Q9NY12 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GAR1Q9NY12 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GAR1Q9NY12 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
GAR1Q9NY12 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GAR1Q9NY12 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GAR1Q9NY12 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.23■□□□□ 0.83
GAR1Q9NY12 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GAR1Q9NY12 AC005559.1-201ENST00000589661 871 ntBASIC20.23■□□□□ 0.83
GAR1Q9NY12 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GAR1Q9NY12 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAR1Q9NY12 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAR1Q9NY12 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAR1Q9NY12 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GAR1Q9NY12 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.22■□□□□ 0.83
GAR1Q9NY12 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GAR1Q9NY12 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GAR1Q9NY12 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GAR1Q9NY12 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
GAR1Q9NY12 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GAR1Q9NY12 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GAR1Q9NY12 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GAR1Q9NY12 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GAR1Q9NY12 AL139393.2-201ENST00000608721 2025 ntBASIC20.19■□□□□ 0.82
GAR1Q9NY12 AP004833.2-201ENST00000532228 1454 ntBASIC20.18■□□□□ 0.82
GAR1Q9NY12 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAR1Q9NY12 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
GAR1Q9NY12 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
GAR1Q9NY12 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAR1Q9NY12 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAR1Q9NY12 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAR1Q9NY12 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
GAR1Q9NY12 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.17■□□□□ 0.82
GAR1Q9NY12 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAR1Q9NY12 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAR1Q9NY12 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.17■□□□□ 0.82
GAR1Q9NY12 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAR1Q9NY12 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GAR1Q9NY12 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAR1Q9NY12 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
GAR1Q9NY12 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAR1Q9NY12 ABHD17AP4-201ENST00000411545 909 ntBASIC20.16■□□□□ 0.82
GAR1Q9NY12 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GAR1Q9NY12 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAR1Q9NY12 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAR1Q9NY12 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
GAR1Q9NY12 MIR3665-201ENST00000578708 105 ntBASIC20.15■□□□□ 0.82
GAR1Q9NY12 AP006261.1-201ENST00000584783 668 ntBASIC20.15■□□□□ 0.82
GAR1Q9NY12 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAR1Q9NY12 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GAR1Q9NY12 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.14■□□□□ 0.82
GAR1Q9NY12 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.14■□□□□ 0.81
GAR1Q9NY12 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
GAR1Q9NY12 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GAR1Q9NY12 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAR1Q9NY12 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
GAR1Q9NY12 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAR1Q9NY12 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.13■□□□□ 0.81
GAR1Q9NY12 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GAR1Q9NY12 HLA-V-202ENST00000446817 847 ntBASIC20.13■□□□□ 0.81
GAR1Q9NY12 AC108673.1-201ENST00000510422 1159 ntBASIC20.13■□□□□ 0.81
GAR1Q9NY12 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.13■□□□□ 0.81
GAR1Q9NY12 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.13■□□□□ 0.81
GAR1Q9NY12 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAR1Q9NY12 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GAR1Q9NY12 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAR1Q9NY12 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.12■□□□□ 0.81
GAR1Q9NY12 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GAR1Q9NY12 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
GAR1Q9NY12 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.12■□□□□ 0.81
GAR1Q9NY12 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GAR1Q9NY12 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GAR1Q9NY12 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GAR1Q9NY12 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GAR1Q9NY12 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GAR1Q9NY12 AL449106.1-201ENST00000608517 1980 ntBASIC20.1■□□□□ 0.81
GAR1Q9NY12 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
GAR1Q9NY12 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 6.7 ms