Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9N2K0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9N2K0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.22■□□□□ 0.99
Q9N2K0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.22■□□□□ 0.99
Q9N2K0 AC005559.1-201ENST00000589661 871 ntBASIC21.22■□□□□ 0.99
Q9N2K0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Q9N2K0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.21■□□□□ 0.99
Q9N2K0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q9N2K0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.21■□□□□ 0.99
Q9N2K0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.2■□□□□ 0.98
Q9N2K0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9N2K0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9N2K0 AC135983.2-203ENST00000454486 1613 ntBASIC21.19■□□□□ 0.98
Q9N2K0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Q9N2K0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9N2K0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9N2K0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9N2K0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
Q9N2K0 SUZ12P1-203ENST00000578195 985 ntBASIC21.18■□□□□ 0.98
Q9N2K0 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.18■□□□□ 0.98
Q9N2K0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Q9N2K0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.17■□□□□ 0.98
Q9N2K0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.17■□□□□ 0.98
Q9N2K0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9N2K0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Q9N2K0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.16■□□□□ 0.98
Q9N2K0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9N2K0 AC108673.1-201ENST00000510422 1159 ntBASIC21.16■□□□□ 0.98
Q9N2K0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.16■□□□□ 0.98
Q9N2K0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Q9N2K0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Q9N2K0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Q9N2K0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9N2K0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Q9N2K0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.15■□□□□ 0.98
Q9N2K0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Q9N2K0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q9N2K0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.14■□□□□ 0.97
Q9N2K0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Q9N2K0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q9N2K0 WHAMMP2-203ENST00000563942 1603 ntBASIC21.13■□□□□ 0.97
Q9N2K0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q9N2K0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9N2K0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.12■□□□□ 0.97
Q9N2K0 AC018358.1-201ENST00000631079 1402 ntBASIC21.12■□□□□ 0.97
Q9N2K0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9N2K0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.12■□□□□ 0.97
Q9N2K0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Q9N2K0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9N2K0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9N2K0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.11■□□□□ 0.97
Q9N2K0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q9N2K0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
Q9N2K0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.11■□□□□ 0.97
Q9N2K0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q9N2K0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Q9N2K0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.1■□□□□ 0.97
Q9N2K0 MIR6090-201ENST00000622481 60 ntBASIC21.1■□□□□ 0.97
Q9N2K0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.1■□□□□ 0.97
Q9N2K0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Q9N2K0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Q9N2K0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Q9N2K0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9N2K0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Q9N2K0 LINC00273-201ENST00000539813 1452 ntBASIC21.08■□□□□ 0.97
Q9N2K0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9N2K0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.08■□□□□ 0.97
Q9N2K0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9N2K0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q9N2K0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q9N2K0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Q9N2K0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q9N2K0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.07■□□□□ 0.96
Q9N2K0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q9N2K0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Q9N2K0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Q9N2K0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Q9N2K0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q9N2K0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.06■□□□□ 0.96
Q9N2K0 DUX4L28-201ENST00000623687 678 ntBASIC21.06■□□□□ 0.96
Q9N2K0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Q9N2K0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Q9N2K0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Q9N2K0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9N2K0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Q9N2K0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9N2K0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9N2K0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q9N2K0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Q9N2K0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms