Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF183Q96D59 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF183Q96D59 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RNF183Q96D59 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF183Q96D59 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 AC008813.1-201ENST00000536597 885 ntBASIC18.62■□□□□ 0.57
RNF183Q96D59 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF183Q96D59 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF183Q96D59 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF183Q96D59 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF183Q96D59 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF183Q96D59 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF183Q96D59 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF183Q96D59 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF183Q96D59 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF183Q96D59 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF183Q96D59 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.6■□□□□ 0.57
RNF183Q96D59 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF183Q96D59 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF183Q96D59 AC110285.7-201ENST00000624417 1536 ntBASIC18.59■□□□□ 0.57
RNF183Q96D59 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
RNF183Q96D59 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF183Q96D59 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF183Q96D59 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF183Q96D59 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF183Q96D59 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF183Q96D59 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RNF183Q96D59 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF183Q96D59 HSD17B1P1-201ENST00000590052 955 ntBASIC18.58■□□□□ 0.56
RNF183Q96D59 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF183Q96D59 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF183Q96D59 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF183Q96D59 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF183Q96D59 AP004833.2-201ENST00000532228 1454 ntBASIC18.58■□□□□ 0.56
RNF183Q96D59 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF183Q96D59 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF183Q96D59 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF183Q96D59 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF183Q96D59 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF183Q96D59 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF183Q96D59 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF183Q96D59 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF183Q96D59 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF183Q96D59 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF183Q96D59 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RNF183Q96D59 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF183Q96D59 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF183Q96D59 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF183Q96D59 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF183Q96D59 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF183Q96D59 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF183Q96D59 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF183Q96D59 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF183Q96D59 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF183Q96D59 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF183Q96D59 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF183Q96D59 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF183Q96D59 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
RNF183Q96D59 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF183Q96D59 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF183Q96D59 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF183Q96D59 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF183Q96D59 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF183Q96D59 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNF183Q96D59 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF183Q96D59 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF183Q96D59 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF183Q96D59 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF183Q96D59 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF183Q96D59 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF183Q96D59 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF183Q96D59 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF183Q96D59 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF183Q96D59 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF183Q96D59 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF183Q96D59 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF183Q96D59 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF183Q96D59 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF183Q96D59 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF183Q96D59 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF183Q96D59 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms