Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AP002414.2-202ENST00000590929 1450 ntBASIC26.33■■□□□ 1.81
PCDH19Q8TAB3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH19Q8TAB3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH19Q8TAB3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH19Q8TAB3 DUX4L29-201ENST00000425409 679 ntBASIC26.32■■□□□ 1.8
PCDH19Q8TAB3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDH19Q8TAB3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH19Q8TAB3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDH19Q8TAB3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDH19Q8TAB3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH19Q8TAB3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH19Q8TAB3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDH19Q8TAB3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDH19Q8TAB3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
PCDH19Q8TAB3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH19Q8TAB3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
PCDH19Q8TAB3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.29■■□□□ 1.8
PCDH19Q8TAB3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH19Q8TAB3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH19Q8TAB3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH19Q8TAB3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH19Q8TAB3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDH19Q8TAB3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH19Q8TAB3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH19Q8TAB3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDH19Q8TAB3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH19Q8TAB3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH19Q8TAB3 BX255925.1-201ENST00000566954 1854 ntBASIC26.27■■□□□ 1.8
PCDH19Q8TAB3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDH19Q8TAB3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDH19Q8TAB3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDH19Q8TAB3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDH19Q8TAB3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PCDH19Q8TAB3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDH19Q8TAB3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDH19Q8TAB3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH19Q8TAB3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH19Q8TAB3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH19Q8TAB3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDH19Q8TAB3 LINC01003-201ENST00000564834 1764 ntBASIC26.24■■□□□ 1.79
PCDH19Q8TAB3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH19Q8TAB3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDH19Q8TAB3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PCDH19Q8TAB3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH19Q8TAB3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH19Q8TAB3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.23■■□□□ 1.79
PCDH19Q8TAB3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH19Q8TAB3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH19Q8TAB3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH19Q8TAB3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH19Q8TAB3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH19Q8TAB3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
PCDH19Q8TAB3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.2■■□□□ 1.78
PCDH19Q8TAB3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH19Q8TAB3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH19Q8TAB3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH19Q8TAB3 ZNRF2P2-203ENST00000454624 420 ntBASIC26.19■■□□□ 1.78
PCDH19Q8TAB3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH19Q8TAB3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDH19Q8TAB3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH19Q8TAB3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH19Q8TAB3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
PCDH19Q8TAB3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PCDH19Q8TAB3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDH19Q8TAB3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDH19Q8TAB3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDH19Q8TAB3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDH19Q8TAB3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDH19Q8TAB3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDH19Q8TAB3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PCDH19Q8TAB3 AC018358.1-201ENST00000631079 1402 ntBASIC26.14■■□□□ 1.77
PCDH19Q8TAB3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH19Q8TAB3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH19Q8TAB3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDH19Q8TAB3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH19Q8TAB3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDH19Q8TAB3 AC110285.7-201ENST00000624417 1536 ntBASIC26.12■■□□□ 1.77
PCDH19Q8TAB3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.11■■□□□ 1.77
PCDH19Q8TAB3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH19Q8TAB3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH19Q8TAB3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH19Q8TAB3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PCDH19Q8TAB3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PCDH19Q8TAB3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.1■■□□□ 1.77
PCDH19Q8TAB3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PCDH19Q8TAB3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
PCDH19Q8TAB3 AL121749.1-202ENST00000609313 2153 ntBASIC26.09■■□□□ 1.77
PCDH19Q8TAB3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDH19Q8TAB3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
PCDH19Q8TAB3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH19Q8TAB3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH19Q8TAB3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
PCDH19Q8TAB3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDH19Q8TAB3 HLA-V-202ENST00000446817 847 ntBASIC26.06■■□□□ 1.76
PCDH19Q8TAB3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDH19Q8TAB3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH19Q8TAB3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH19Q8TAB3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH19Q8TAB3 LINC01971-201ENST00000617888 1048 ntBASIC26.05■■□□□ 1.76
PCDH19Q8TAB3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms