Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
SLC44A5Q8NCS7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.22■■■□□ 2.43
SLC44A5Q8NCS7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SLC44A5Q8NCS7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SLC44A5Q8NCS7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SLC44A5Q8NCS7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
SLC44A5Q8NCS7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.21■■■□□ 2.43
SLC44A5Q8NCS7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.21■■■□□ 2.43
SLC44A5Q8NCS7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
SLC44A5Q8NCS7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
SLC44A5Q8NCS7 AP004833.2-201ENST00000532228 1454 ntBASIC30.19■■■□□ 2.42
SLC44A5Q8NCS7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.19■■■□□ 2.42
SLC44A5Q8NCS7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SLC44A5Q8NCS7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SLC44A5Q8NCS7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.18■■■□□ 2.42
SLC44A5Q8NCS7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLC44A5Q8NCS7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
SLC44A5Q8NCS7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLC44A5Q8NCS7 AC008813.1-201ENST00000536597 885 ntBASIC30.17■■■□□ 2.42
SLC44A5Q8NCS7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SLC44A5Q8NCS7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SLC44A5Q8NCS7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SLC44A5Q8NCS7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.16■■■□□ 2.42
SLC44A5Q8NCS7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.15■■■□□ 2.42
SLC44A5Q8NCS7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.14■■■□□ 2.42
SLC44A5Q8NCS7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SLC44A5Q8NCS7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.13■■■□□ 2.41
SLC44A5Q8NCS7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.13■■■□□ 2.41
SLC44A5Q8NCS7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.13■■■□□ 2.41
SLC44A5Q8NCS7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
SLC44A5Q8NCS7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SLC44A5Q8NCS7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
SLC44A5Q8NCS7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SLC44A5Q8NCS7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
SLC44A5Q8NCS7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.12■■■□□ 2.41
SLC44A5Q8NCS7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SLC44A5Q8NCS7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SLC44A5Q8NCS7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SLC44A5Q8NCS7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.11■■■□□ 2.41
SLC44A5Q8NCS7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SLC44A5Q8NCS7 ABCB10P3-201ENST00000561950 2166 ntBASIC30.11■■■□□ 2.41
SLC44A5Q8NCS7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.11■■■□□ 2.41
SLC44A5Q8NCS7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SLC44A5Q8NCS7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.1■■■□□ 2.41
SLC44A5Q8NCS7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
SLC44A5Q8NCS7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SLC44A5Q8NCS7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SLC44A5Q8NCS7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.09■■■□□ 2.41
SLC44A5Q8NCS7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.09■■■□□ 2.41
SLC44A5Q8NCS7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SLC44A5Q8NCS7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
SLC44A5Q8NCS7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SLC44A5Q8NCS7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.08■■■□□ 2.41
SLC44A5Q8NCS7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SLC44A5Q8NCS7 GPX1-201ENST00000419349 1106 ntBASIC30.07■■■□□ 2.4
SLC44A5Q8NCS7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
SLC44A5Q8NCS7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SLC44A5Q8NCS7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.06■■■□□ 2.4
SLC44A5Q8NCS7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SLC44A5Q8NCS7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.05■■■□□ 2.4
SLC44A5Q8NCS7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC44A5Q8NCS7 AC148477.6-201ENST00000623746 465 ntBASIC30.05■■■□□ 2.4
SLC44A5Q8NCS7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC44A5Q8NCS7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLC44A5Q8NCS7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.04■■■□□ 2.4
SLC44A5Q8NCS7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.04■■■□□ 2.4
SLC44A5Q8NCS7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLC44A5Q8NCS7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
SLC44A5Q8NCS7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.04■■■□□ 2.4
SLC44A5Q8NCS7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
SLC44A5Q8NCS7 MIR219A2-201ENST00000608502 1504 ntBASIC30.03■■■□□ 2.4
SLC44A5Q8NCS7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SLC44A5Q8NCS7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.03■■■□□ 2.4
SLC44A5Q8NCS7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
SLC44A5Q8NCS7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SLC44A5Q8NCS7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
SLC44A5Q8NCS7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.4
SLC44A5Q8NCS7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SLC44A5Q8NCS7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.01■■■□□ 2.39
SLC44A5Q8NCS7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30■■■□□ 2.39
SLC44A5Q8NCS7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLC44A5Q8NCS7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.99■■■□□ 2.39
SLC44A5Q8NCS7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.99■■■□□ 2.39
SLC44A5Q8NCS7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SLC44A5Q8NCS7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
SLC44A5Q8NCS7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SLC44A5Q8NCS7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.98■■■□□ 2.39
SLC44A5Q8NCS7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.97■■■□□ 2.39
SLC44A5Q8NCS7 AC022413.1-201ENST00000624602 984 ntBASIC29.97■■■□□ 2.39
SLC44A5Q8NCS7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.97■■■□□ 2.39
SLC44A5Q8NCS7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
SLC44A5Q8NCS7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.96■■■□□ 2.39
SLC44A5Q8NCS7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLC44A5Q8NCS7 RARRES2P2-201ENST00000394842 485 ntBASIC29.96■■■□□ 2.39
SLC44A5Q8NCS7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.96■■■□□ 2.39
SLC44A5Q8NCS7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.96■■■□□ 2.39
SLC44A5Q8NCS7 AC139426.1-201ENST00000568218 2529 ntBASIC29.96■■■□□ 2.39
SLC44A5Q8NCS7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.95■■■□□ 2.39
SLC44A5Q8NCS7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SLC44A5Q8NCS7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.95■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms