Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CPSF7Q8N684 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CPSF7Q8N684 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CPSF7Q8N684 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
CPSF7Q8N684 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.74■■□□□ 1.55
CPSF7Q8N684 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CPSF7Q8N684 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPSF7Q8N684 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF7Q8N684 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF7Q8N684 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.73■■□□□ 1.55
CPSF7Q8N684 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF7Q8N684 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CPSF7Q8N684 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPSF7Q8N684 AC135731.1-201ENST00000569415 2548 ntBASIC24.72■■□□□ 1.55
CPSF7Q8N684 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF7Q8N684 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CPSF7Q8N684 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPSF7Q8N684 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPSF7Q8N684 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CPSF7Q8N684 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.69■■□□□ 1.54
CPSF7Q8N684 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPSF7Q8N684 AC127502.1-201ENST00000399971 1502 ntBASIC24.69■■□□□ 1.54
CPSF7Q8N684 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPSF7Q8N684 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CPSF7Q8N684 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CPSF7Q8N684 AC044849.2-201ENST00000606596 710 ntBASIC24.68■■□□□ 1.54
CPSF7Q8N684 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CPSF7Q8N684 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.67■■□□□ 1.54
CPSF7Q8N684 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPSF7Q8N684 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.67■■□□□ 1.54
CPSF7Q8N684 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.67■■□□□ 1.54
CPSF7Q8N684 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.66■■□□□ 1.54
CPSF7Q8N684 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CPSF7Q8N684 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CPSF7Q8N684 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CPSF7Q8N684 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.65■■□□□ 1.54
CPSF7Q8N684 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.65■■□□□ 1.54
CPSF7Q8N684 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPSF7Q8N684 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.64■■□□□ 1.53
CPSF7Q8N684 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPSF7Q8N684 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
CPSF7Q8N684 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPSF7Q8N684 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CPSF7Q8N684 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CPSF7Q8N684 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CPSF7Q8N684 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.63■■□□□ 1.53
CPSF7Q8N684 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CPSF7Q8N684 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPSF7Q8N684 AL449106.1-201ENST00000608517 1980 ntBASIC24.62■■□□□ 1.53
CPSF7Q8N684 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPSF7Q8N684 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CPSF7Q8N684 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CPSF7Q8N684 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPSF7Q8N684 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPSF7Q8N684 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
CPSF7Q8N684 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPSF7Q8N684 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CPSF7Q8N684 AC100797.4-201ENST00000631653 1827 ntBASIC24.59■■□□□ 1.53
CPSF7Q8N684 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.59■■□□□ 1.53
CPSF7Q8N684 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.59■■□□□ 1.53
CPSF7Q8N684 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CPSF7Q8N684 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.58■■□□□ 1.53
CPSF7Q8N684 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CPSF7Q8N684 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.53
CPSF7Q8N684 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CPSF7Q8N684 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPSF7Q8N684 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPSF7Q8N684 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CPSF7Q8N684 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CPSF7Q8N684 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPSF7Q8N684 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPSF7Q8N684 ABHD17AP4-201ENST00000411545 909 ntBASIC24.56■■□□□ 1.52
CPSF7Q8N684 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPSF7Q8N684 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CPSF7Q8N684 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
CPSF7Q8N684 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 AP002414.2-202ENST00000590929 1450 ntBASIC24.54■■□□□ 1.52
CPSF7Q8N684 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPSF7Q8N684 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.53■■□□□ 1.52
CPSF7Q8N684 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPSF7Q8N684 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CPSF7Q8N684 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPSF7Q8N684 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPSF7Q8N684 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms