Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.37■■□□□ 1.33
DEPDC4Q8N2C3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.37■■□□□ 1.33
DEPDC4Q8N2C3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
DEPDC4Q8N2C3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
DEPDC4Q8N2C3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
DEPDC4Q8N2C3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
DEPDC4Q8N2C3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.35■■□□□ 1.33
DEPDC4Q8N2C3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DEPDC4Q8N2C3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
DEPDC4Q8N2C3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DEPDC4Q8N2C3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DEPDC4Q8N2C3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
DEPDC4Q8N2C3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DEPDC4Q8N2C3 DUX4L28-201ENST00000623687 678 ntBASIC23.33■■□□□ 1.33
DEPDC4Q8N2C3 AC044849.2-201ENST00000606596 710 ntBASIC23.32■■□□□ 1.32
DEPDC4Q8N2C3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
DEPDC4Q8N2C3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DEPDC4Q8N2C3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DEPDC4Q8N2C3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DEPDC4Q8N2C3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DEPDC4Q8N2C3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
DEPDC4Q8N2C3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.31■■□□□ 1.32
DEPDC4Q8N2C3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DEPDC4Q8N2C3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
DEPDC4Q8N2C3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DEPDC4Q8N2C3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DEPDC4Q8N2C3 AC087741.3-201ENST00000624270 1347 ntBASIC23.3■■□□□ 1.32
DEPDC4Q8N2C3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC4Q8N2C3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.29■■□□□ 1.32
DEPDC4Q8N2C3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC4Q8N2C3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
DEPDC4Q8N2C3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
DEPDC4Q8N2C3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC4Q8N2C3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC4Q8N2C3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.28■■□□□ 1.32
DEPDC4Q8N2C3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC4Q8N2C3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC4Q8N2C3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
DEPDC4Q8N2C3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC4Q8N2C3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.28■■□□□ 1.32
DEPDC4Q8N2C3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC4Q8N2C3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DEPDC4Q8N2C3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DEPDC4Q8N2C3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
DEPDC4Q8N2C3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.26■■□□□ 1.31
DEPDC4Q8N2C3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
DEPDC4Q8N2C3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
DEPDC4Q8N2C3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DEPDC4Q8N2C3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DEPDC4Q8N2C3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DEPDC4Q8N2C3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.25■■□□□ 1.31
DEPDC4Q8N2C3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DEPDC4Q8N2C3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
DEPDC4Q8N2C3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
DEPDC4Q8N2C3 AL449106.1-201ENST00000608517 1980 ntBASIC23.24■■□□□ 1.31
DEPDC4Q8N2C3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DEPDC4Q8N2C3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
DEPDC4Q8N2C3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.23■■□□□ 1.31
DEPDC4Q8N2C3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.23■■□□□ 1.31
DEPDC4Q8N2C3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
DEPDC4Q8N2C3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.22■■□□□ 1.31
DEPDC4Q8N2C3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.22■■□□□ 1.31
DEPDC4Q8N2C3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DEPDC4Q8N2C3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DEPDC4Q8N2C3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DEPDC4Q8N2C3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DEPDC4Q8N2C3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DEPDC4Q8N2C3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DEPDC4Q8N2C3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DEPDC4Q8N2C3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DEPDC4Q8N2C3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC4Q8N2C3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC4Q8N2C3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC4Q8N2C3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.2■■□□□ 1.3
DEPDC4Q8N2C3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.2■■□□□ 1.3
DEPDC4Q8N2C3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DEPDC4Q8N2C3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
DEPDC4Q8N2C3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
DEPDC4Q8N2C3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC4Q8N2C3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC4Q8N2C3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC4Q8N2C3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC4Q8N2C3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC4Q8N2C3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DEPDC4Q8N2C3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.18■■□□□ 1.3
DEPDC4Q8N2C3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC4Q8N2C3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DEPDC4Q8N2C3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DEPDC4Q8N2C3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DEPDC4Q8N2C3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DEPDC4Q8N2C3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms