Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTTNQ86VV8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTTNQ86VV8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.29■■□□□ 1.16
RTTNQ86VV8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTTNQ86VV8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTTNQ86VV8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RTTNQ86VV8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.29■■□□□ 1.16
RTTNQ86VV8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTTNQ86VV8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.28■■□□□ 1.16
RTTNQ86VV8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTTNQ86VV8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.28■■□□□ 1.16
RTTNQ86VV8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTTNQ86VV8 AP004833.2-201ENST00000532228 1454 ntBASIC22.27■■□□□ 1.16
RTTNQ86VV8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
RTTNQ86VV8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
RTTNQ86VV8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.26■■□□□ 1.15
RTTNQ86VV8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.26■■□□□ 1.15
RTTNQ86VV8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.26■■□□□ 1.15
RTTNQ86VV8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTTNQ86VV8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTTNQ86VV8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.24■■□□□ 1.15
RTTNQ86VV8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTTNQ86VV8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTTNQ86VV8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.23■■□□□ 1.15
RTTNQ86VV8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTTNQ86VV8 MIR3648-2-201ENST00000581792 180 ntBASIC22.23■■□□□ 1.15
RTTNQ86VV8 MIR3648-1-201ENST00000615959 180 ntBASIC22.23■■□□□ 1.15
RTTNQ86VV8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTTNQ86VV8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
RTTNQ86VV8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTTNQ86VV8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTTNQ86VV8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTTNQ86VV8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.21■■□□□ 1.15
RTTNQ86VV8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTTNQ86VV8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RTTNQ86VV8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTTNQ86VV8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTTNQ86VV8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTTNQ86VV8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTTNQ86VV8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.21■■□□□ 1.15
RTTNQ86VV8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTTNQ86VV8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.2■■□□□ 1.14
RTTNQ86VV8 AC016575.1-201ENST00000607026 382 ntBASIC22.2■■□□□ 1.14
RTTNQ86VV8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTTNQ86VV8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTTNQ86VV8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RTTNQ86VV8 CR559946.2-201ENST00000623684 991 ntBASIC22.19■■□□□ 1.14
RTTNQ86VV8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTTNQ86VV8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTTNQ86VV8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTTNQ86VV8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.18■■□□□ 1.14
RTTNQ86VV8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.18■■□□□ 1.14
RTTNQ86VV8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RTTNQ86VV8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RTTNQ86VV8 LINC01003-201ENST00000564834 1764 ntBASIC22.18■■□□□ 1.14
RTTNQ86VV8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTTNQ86VV8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RTTNQ86VV8 LINC01971-201ENST00000617888 1048 ntBASIC22.17■■□□□ 1.14
RTTNQ86VV8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTTNQ86VV8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTTNQ86VV8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTTNQ86VV8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.17■■□□□ 1.14
RTTNQ86VV8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.17■■□□□ 1.14
RTTNQ86VV8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.17■■□□□ 1.14
RTTNQ86VV8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTTNQ86VV8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.16■■□□□ 1.14
RTTNQ86VV8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.16■■□□□ 1.14
RTTNQ86VV8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTTNQ86VV8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTTNQ86VV8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.15■■□□□ 1.14
RTTNQ86VV8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.15■■□□□ 1.14
RTTNQ86VV8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.15■■□□□ 1.14
RTTNQ86VV8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.14■■□□□ 1.14
RTTNQ86VV8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L13-201ENST00000554103 1267 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L15-201ENST00000611059 1267 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L23-201ENST00000615195 1269 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L24-201ENST00000617576 1269 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L22-201ENST00000618238 1269 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L20-201ENST00000619712 1269 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L21-201ENST00000622058 1269 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L10-201ENST00000622460 1267 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 DUX4L25-201ENST00000624915 1269 ntBASIC22.14■■□□□ 1.13
RTTNQ86VV8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTTNQ86VV8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RTTNQ86VV8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RTTNQ86VV8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTTNQ86VV8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.13■■□□□ 1.13
RTTNQ86VV8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTTNQ86VV8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.12■■□□□ 1.13
RTTNQ86VV8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTTNQ86VV8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTTNQ86VV8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTTNQ86VV8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTTNQ86VV8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTTNQ86VV8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTTNQ86VV8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTTNQ86VV8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.11■■□□□ 1.13
RTTNQ86VV8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.11■■□□□ 1.13
RTTNQ86VV8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms