Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS13BQ7Z7G8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS13BQ7Z7G8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS13BQ7Z7G8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
VPS13BQ7Z7G8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VPS13BQ7Z7G8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
VPS13BQ7Z7G8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS13BQ7Z7G8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS13BQ7Z7G8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS13BQ7Z7G8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS13BQ7Z7G8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS13BQ7Z7G8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS13BQ7Z7G8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS13BQ7Z7G8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS13BQ7Z7G8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS13BQ7Z7G8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS13BQ7Z7G8 AC148477.6-201ENST00000623746 465 ntBASIC15.93■□□□□ 0.14
VPS13BQ7Z7G8 AL135925.1-201ENST00000605920 1701 ntBASIC15.93■□□□□ 0.14
VPS13BQ7Z7G8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS13BQ7Z7G8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
VPS13BQ7Z7G8 AC127502.1-201ENST00000399971 1502 ntBASIC15.93■□□□□ 0.14
VPS13BQ7Z7G8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS13BQ7Z7G8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS13BQ7Z7G8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS13BQ7Z7G8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VPS13BQ7Z7G8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VPS13BQ7Z7G8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS13BQ7Z7G8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VPS13BQ7Z7G8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS13BQ7Z7G8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.92■□□□□ 0.14
VPS13BQ7Z7G8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
VPS13BQ7Z7G8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VPS13BQ7Z7G8 AC135983.2-203ENST00000454486 1613 ntBASIC15.91■□□□□ 0.14
VPS13BQ7Z7G8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS13BQ7Z7G8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS13BQ7Z7G8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VPS13BQ7Z7G8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS13BQ7Z7G8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.9■□□□□ 0.14
VPS13BQ7Z7G8 AC129492.7-201ENST00000622992 756 ntBASIC15.9■□□□□ 0.14
VPS13BQ7Z7G8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS13BQ7Z7G8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
VPS13BQ7Z7G8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS13BQ7Z7G8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS13BQ7Z7G8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS13BQ7Z7G8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
VPS13BQ7Z7G8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS13BQ7Z7G8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS13BQ7Z7G8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VPS13BQ7Z7G8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS13BQ7Z7G8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
VPS13BQ7Z7G8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13BQ7Z7G8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC15.86■□□□□ 0.13
VPS13BQ7Z7G8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VPS13BQ7Z7G8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13BQ7Z7G8 AL157400.5-201ENST00000507624 621 ntBASIC15.85■□□□□ 0.13
VPS13BQ7Z7G8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13BQ7Z7G8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13BQ7Z7G8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VPS13BQ7Z7G8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS13BQ7Z7G8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.84■□□□□ 0.13
VPS13BQ7Z7G8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VPS13BQ7Z7G8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VPS13BQ7Z7G8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VPS13BQ7Z7G8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC15.83■□□□□ 0.13
VPS13BQ7Z7G8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS13BQ7Z7G8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
VPS13BQ7Z7G8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VPS13BQ7Z7G8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS13BQ7Z7G8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS13BQ7Z7G8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS13BQ7Z7G8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS13BQ7Z7G8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS13BQ7Z7G8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS13BQ7Z7G8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS13BQ7Z7G8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13BQ7Z7G8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13BQ7Z7G8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13BQ7Z7G8 AC007029.1-201ENST00000604183 313 ntBASIC15.81■□□□□ 0.12
VPS13BQ7Z7G8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS13BQ7Z7G8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms