Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 AC022413.1-201ENST00000624602 984 ntBASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAI1Q7Z5J4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RAI1Q7Z5J4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAI1Q7Z5J4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAI1Q7Z5J4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 AC012354.3-201ENST00000623734 483 ntBASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAI1Q7Z5J4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAI1Q7Z5J4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAI1Q7Z5J4 AC092296.2-201ENST00000589470 999 ntBASIC21.89■■□□□ 1.09
RAI1Q7Z5J4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RAI1Q7Z5J4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RAI1Q7Z5J4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RAI1Q7Z5J4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAI1Q7Z5J4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAI1Q7Z5J4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAI1Q7Z5J4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.87■■□□□ 1.09
RAI1Q7Z5J4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 AC110285.7-201ENST00000624417 1536 ntBASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAI1Q7Z5J4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.85■■□□□ 1.09
RAI1Q7Z5J4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAI1Q7Z5J4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RAI1Q7Z5J4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RAI1Q7Z5J4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAI1Q7Z5J4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAI1Q7Z5J4 MIR219A2-201ENST00000608502 1504 ntBASIC21.83■■□□□ 1.09
RAI1Q7Z5J4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAI1Q7Z5J4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAI1Q7Z5J4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.8■■□□□ 1.08
RAI1Q7Z5J4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAI1Q7Z5J4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RAI1Q7Z5J4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
RAI1Q7Z5J4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAI1Q7Z5J4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.77■■□□□ 1.08
RAI1Q7Z5J4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAI1Q7Z5J4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RAI1Q7Z5J4 KRT18P60-201ENST00000312876 1297 ntBASIC21.76■■□□□ 1.07
RAI1Q7Z5J4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms