Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC100797.4-201ENST00000631653 1827 ntBASIC32.04■■■□□ 2.72
UBE3BQ7Z3V4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
UBE3BQ7Z3V4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.03■■■□□ 2.72
UBE3BQ7Z3V4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
UBE3BQ7Z3V4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
UBE3BQ7Z3V4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
UBE3BQ7Z3V4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
UBE3BQ7Z3V4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
UBE3BQ7Z3V4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
UBE3BQ7Z3V4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.02■■■□□ 2.72
UBE3BQ7Z3V4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
UBE3BQ7Z3V4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
UBE3BQ7Z3V4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
UBE3BQ7Z3V4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32■■■□□ 2.71
UBE3BQ7Z3V4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
UBE3BQ7Z3V4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32■■■□□ 2.71
UBE3BQ7Z3V4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32■■■□□ 2.71
UBE3BQ7Z3V4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.99■■■□□ 2.71
UBE3BQ7Z3V4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
UBE3BQ7Z3V4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.99■■■□□ 2.71
UBE3BQ7Z3V4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.99■■■□□ 2.71
UBE3BQ7Z3V4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
UBE3BQ7Z3V4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.98■■■□□ 2.71
UBE3BQ7Z3V4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.98■■■□□ 2.71
UBE3BQ7Z3V4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.98■■■□□ 2.71
UBE3BQ7Z3V4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
UBE3BQ7Z3V4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
UBE3BQ7Z3V4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.97■■■□□ 2.71
UBE3BQ7Z3V4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.97■■■□□ 2.71
UBE3BQ7Z3V4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
UBE3BQ7Z3V4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.97■■■□□ 2.71
UBE3BQ7Z3V4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.97■■■□□ 2.71
UBE3BQ7Z3V4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
UBE3BQ7Z3V4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
UBE3BQ7Z3V4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
UBE3BQ7Z3V4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
UBE3BQ7Z3V4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.95■■■□□ 2.71
UBE3BQ7Z3V4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.95■■■□□ 2.71
UBE3BQ7Z3V4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
UBE3BQ7Z3V4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
UBE3BQ7Z3V4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
UBE3BQ7Z3V4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
UBE3BQ7Z3V4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.94■■■□□ 2.7
UBE3BQ7Z3V4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
UBE3BQ7Z3V4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
UBE3BQ7Z3V4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
UBE3BQ7Z3V4 ABCB10P3-201ENST00000561950 2166 ntBASIC31.91■■■□□ 2.7
UBE3BQ7Z3V4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
UBE3BQ7Z3V4 AC148477.6-201ENST00000623746 465 ntBASIC31.91■■■□□ 2.7
UBE3BQ7Z3V4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
UBE3BQ7Z3V4 GPX1-201ENST00000419349 1106 ntBASIC31.9■■■□□ 2.7
UBE3BQ7Z3V4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
UBE3BQ7Z3V4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
UBE3BQ7Z3V4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.9■■■□□ 2.7
UBE3BQ7Z3V4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
UBE3BQ7Z3V4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
UBE3BQ7Z3V4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
UBE3BQ7Z3V4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.89■■■□□ 2.7
UBE3BQ7Z3V4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
UBE3BQ7Z3V4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
UBE3BQ7Z3V4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
UBE3BQ7Z3V4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
UBE3BQ7Z3V4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.87■■■□□ 2.69
UBE3BQ7Z3V4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
UBE3BQ7Z3V4 MIR219A2-201ENST00000608502 1504 ntBASIC31.86■■■□□ 2.69
UBE3BQ7Z3V4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.86■■■□□ 2.69
UBE3BQ7Z3V4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
UBE3BQ7Z3V4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.86■■■□□ 2.69
UBE3BQ7Z3V4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
UBE3BQ7Z3V4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
UBE3BQ7Z3V4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.84■■■□□ 2.69
UBE3BQ7Z3V4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
UBE3BQ7Z3V4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
UBE3BQ7Z3V4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
UBE3BQ7Z3V4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
UBE3BQ7Z3V4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.81■■■□□ 2.68
UBE3BQ7Z3V4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.81■■■□□ 2.68
UBE3BQ7Z3V4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.81■■■□□ 2.68
UBE3BQ7Z3V4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.81■■■□□ 2.68
UBE3BQ7Z3V4 AC022413.1-201ENST00000624602 984 ntBASIC31.81■■■□□ 2.68
UBE3BQ7Z3V4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.81■■■□□ 2.68
UBE3BQ7Z3V4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
UBE3BQ7Z3V4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
UBE3BQ7Z3V4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
UBE3BQ7Z3V4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.79■■■□□ 2.68
UBE3BQ7Z3V4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.79■■■□□ 2.68
UBE3BQ7Z3V4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
UBE3BQ7Z3V4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.79■■■□□ 2.68
UBE3BQ7Z3V4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
UBE3BQ7Z3V4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.78■■■□□ 2.68
UBE3BQ7Z3V4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
UBE3BQ7Z3V4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.77■■■□□ 2.68
UBE3BQ7Z3V4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.77■■■□□ 2.68
UBE3BQ7Z3V4 RARRES2P2-201ENST00000394842 485 ntBASIC31.77■■■□□ 2.68
UBE3BQ7Z3V4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
UBE3BQ7Z3V4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.77■■■□□ 2.68
UBE3BQ7Z3V4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.76■■■□□ 2.68
UBE3BQ7Z3V4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
UBE3BQ7Z3V4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.76■■■□□ 2.67
UBE3BQ7Z3V4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms