Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDPF1Q6NVV7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.28■□□□□ 0.68
CDPF1Q6NVV7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDPF1Q6NVV7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDPF1Q6NVV7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.27■□□□□ 0.68
CDPF1Q6NVV7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDPF1Q6NVV7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDPF1Q6NVV7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDPF1Q6NVV7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDPF1Q6NVV7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDPF1Q6NVV7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
CDPF1Q6NVV7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDPF1Q6NVV7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDPF1Q6NVV7 AC091060.1-201ENST00000623524 1766 ntBASIC19.24■□□□□ 0.67
CDPF1Q6NVV7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDPF1Q6NVV7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDPF1Q6NVV7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.24■□□□□ 0.67
CDPF1Q6NVV7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDPF1Q6NVV7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDPF1Q6NVV7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDPF1Q6NVV7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDPF1Q6NVV7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDPF1Q6NVV7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.23■□□□□ 0.67
CDPF1Q6NVV7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.23■□□□□ 0.67
CDPF1Q6NVV7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDPF1Q6NVV7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.22■□□□□ 0.67
CDPF1Q6NVV7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDPF1Q6NVV7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDPF1Q6NVV7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDPF1Q6NVV7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDPF1Q6NVV7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDPF1Q6NVV7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.21■□□□□ 0.67
CDPF1Q6NVV7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDPF1Q6NVV7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDPF1Q6NVV7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDPF1Q6NVV7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDPF1Q6NVV7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDPF1Q6NVV7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CDPF1Q6NVV7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.2■□□□□ 0.66
CDPF1Q6NVV7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDPF1Q6NVV7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.19■□□□□ 0.66
CDPF1Q6NVV7 AC012676.1-201ENST00000574705 1949 ntBASIC19.19■□□□□ 0.66
CDPF1Q6NVV7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDPF1Q6NVV7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDPF1Q6NVV7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDPF1Q6NVV7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDPF1Q6NVV7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
CDPF1Q6NVV7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDPF1Q6NVV7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDPF1Q6NVV7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDPF1Q6NVV7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDPF1Q6NVV7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CDPF1Q6NVV7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDPF1Q6NVV7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.17■□□□□ 0.66
CDPF1Q6NVV7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 AC079834.2-201ENST00000609776 1949 ntBASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 DYNLL1-208ENST00000550178 581 ntBASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDPF1Q6NVV7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDPF1Q6NVV7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDPF1Q6NVV7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.14■□□□□ 0.66
CDPF1Q6NVV7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDPF1Q6NVV7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CDPF1Q6NVV7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDPF1Q6NVV7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDPF1Q6NVV7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDPF1Q6NVV7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDPF1Q6NVV7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDPF1Q6NVV7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDPF1Q6NVV7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDPF1Q6NVV7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.12■□□□□ 0.65
CDPF1Q6NVV7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.12■□□□□ 0.65
CDPF1Q6NVV7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDPF1Q6NVV7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDPF1Q6NVV7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDPF1Q6NVV7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDPF1Q6NVV7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDPF1Q6NVV7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDPF1Q6NVV7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDPF1Q6NVV7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.11■□□□□ 0.65
CDPF1Q6NVV7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDPF1Q6NVV7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDPF1Q6NVV7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDPF1Q6NVV7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDPF1Q6NVV7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDPF1Q6NVV7 AL139393.2-201ENST00000608721 2025 ntBASIC19.1■□□□□ 0.65
CDPF1Q6NVV7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDPF1Q6NVV7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDPF1Q6NVV7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDPF1Q6NVV7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDPF1Q6NVV7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDPF1Q6NVV7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDPF1Q6NVV7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDPF1Q6NVV7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms